Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC078817.1-201ENST00000492623 435 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AC026801.2-201ENST00000515352 425 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-64P-201ENST00000517119 105 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 MIR5187-201ENST00000583479 76 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 MIR4293-201ENST00000584305 78 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AC010928.3-201ENST00000587712 541 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AL034351.1-201ENST00000605288 668 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AL136363.1-201ENST00000605349 337 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AC009161.2-201ENST00000624626 138 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 MIR4275-201ENST00000636486 87 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AC004925.1-201ENST00000624256 2706 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AP004289.2-201ENST00000444413 1457 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.65□□□□□ -1.82
TCRBV7S3A2A0A539 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
TCRBV7S3A2A0A539 AC138915.3-201ENST00000562908 1389 ntBASIC3.65□□□□□ -1.82
TCRBV7S3A2A0A539 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.65□□□□□ -1.82
TCRBV7S3A2A0A539 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.65□□□□□ -1.82
TCRBV7S3A2A0A539 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TCRBV7S3A2A0A539 HSPE1P11-201ENST00000339579 310 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 Y_RNA.9-201ENST00000362354 101 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 Y_RNA.372-201ENST00000365599 102 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 RNU1-39P-201ENST00000383897 165 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-1074P-201ENST00000383995 104 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 U8.11-201ENST00000384699 133 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 U8.12-201ENST00000384701 133 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 RNA5SP107-201ENST00000411358 122 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 SSXP9-201ENST00000417503 292 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 DBIP2-201ENST00000419076 262 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 PPP1R11P2-201ENST00000423543 382 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 GPR143P-201ENST00000434155 205 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 H2AFZP6-201ENST00000444403 394 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AC079781.2-201ENST00000446424 169 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 RPL23AP20-201ENST00000447965 421 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 Z99127.3-201ENST00000448158 395 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AL162389.1-201ENST00000449233 177 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 RPS24P6-201ENST00000452670 400 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 NUTF2P7-201ENST00000453086 375 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 MTND2P24-201ENST00000453434 806 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 HMGB3P30-201ENST00000457863 606 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 U8.18-201ENST00000459285 133 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 RPS15AP36-201ENST00000492022 382 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AC026402.1-201ENST00000513642 170 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 RNU2-10P-201ENST00000516375 211 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 SNORA31.20-201ENST00000517111 133 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-1220P-201ENST00000517126 108 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 OR8R1P-201ENST00000543943 764 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AL512310.1-201ENST00000548639 172 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 HMGB1P33-201ENST00000563485 527 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AC007224.1-201ENST00000564410 144 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AL606834.2-201ENST00000602954 668 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AC067959.1-201ENST00000604334 379 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AP001330.5-201ENST00000607176 411 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 TUG1_2.1-201ENST00000614234 87 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AC022149.2-201ENST00000621061 203 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 AC005609.4-201ENST00000625071 447 ntBASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.65□□□□□ -1.83
TCRBV7S3A2A0A539 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 TAB3P1-202ENST00000452645 1634 ntBASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 SNORD56.2-201ENST00000363242 71 ntBASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 Y_RNA.248-201ENST00000364501 109 ntBASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 SNORA70.2-201ENST00000364506 135 ntBASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 Y_RNA.450-201ENST00000384198 113 ntBASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 MIR184-201ENST00000384962 84 ntBASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 RPL32P23-201ENST00000397237 405 ntBASIC3.64□□□□□ -1.83
TCRBV7S3A2A0A539 AL590002.1-201ENST00000406554 418 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms