Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC110774.1-201ENST00000623567 2018 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 RNU4-82P-201ENST00000362443 140 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 SNORD62.1-201ENST00000362541 86 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 SNORA51.4-201ENST00000364993 124 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 RNU6-157P-201ENST00000383957 107 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 MIR135A2-201ENST00000384854 100 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 EI24P2-201ENST00000397776 1076 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 RSL24D1P4-201ENST00000400938 484 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 HSPE1P28-201ENST00000443139 211 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 RPL17P49-201ENST00000443728 411 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 SNORD11.1-201ENST00000459482 85 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 RPL7P18-201ENST00000478965 734 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 HSPE1P23-201ENST00000509838 286 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC017037.2-201ENST00000513850 890 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 RNA5SP380-201ENST00000517190 98 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 SNRPGP16-201ENST00000533275 226 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 DUXAP1-201ENST00000556632 463 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 OR4K8P-201ENST00000578842 1048 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC012119.1-201ENST00000603184 222 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AP001330.4-201ENST00000604350 154 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AL596245.1-201ENST00000618994 362 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AL445264.1-201ENST00000621719 171 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 AC006927.4-201ENST00000639187 543 ntBASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SMIM28A0A1B0GU29 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 FRG1BP-201ENST00000278882 761 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 Y_RNA.234-201ENST00000364409 97 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 RPS3AP26-201ENST00000398259 784 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AL590004.2-201ENST00000404787 371 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 USP9YP20-201ENST00000419224 558 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 TXNL1P1-201ENST00000429528 554 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 MTND1P32-201ENST00000433043 938 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 MTND4P6-201ENST00000438297 472 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC009969.1-201ENST00000438726 172 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC011816.1-201ENST00000441346 546 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 MTND5P14-201ENST00000441481 1267 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC002381.1-201ENST00000447049 280 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 ARPC3P5-201ENST00000448802 534 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 MTND1P31-201ENST00000449206 961 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 MEMO1P3-201ENST00000459811 302 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 HMGN2P13-201ENST00000476476 274 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC105914.1-201ENST00000511798 226 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 RN7SKP265-201ENST00000516448 223 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC100870.1-201ENST00000522035 505 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC243972.3-201ENST00000539655 198 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 CR383656.7-201ENST00000548164 174 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AL355836.1-201ENST00000555951 870 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC009097.3-201ENST00000563557 1018 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 SNORD84-203ENST00000584275 78 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC112220.3-201ENST00000605502 502 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC026790.2-201ENST00000606282 430 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC097478.2-201ENST00000610572 514 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AC068787.1-201ENST00000623908 691 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 AL359693.1-201ENST00000614959 2407 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 ZNF826P-207ENST00000622273 1910 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 MAPK10-362ENST00000641864 4484 ntBASIC2.8□□□□□ -1.96
SMIM28A0A1B0GU29 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 300.9 ms