Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AL139276.1-201ENST00000311910 1001 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 DEFB108F-201ENST00000344638 222 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 Y_RNA.61-201ENST00000362835 102 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 SNORD81.2-201ENST00000365153 76 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 Y_RNA.529-201ENST00000384586 119 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 RNU6-510P-201ENST00000391239 108 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 RNU4-46P-201ENST00000410818 138 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 RNU2-71P-201ENST00000411395 189 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AL365400.1-201ENST00000431854 640 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 KCTD9P3-201ENST00000434597 1169 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 OR4C10P-201ENST00000434991 931 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 RPL23AP93-201ENST00000440847 484 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AC073587.1-201ENST00000447093 876 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AC092001.1-201ENST00000453012 261 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 SCARNA18-201ENST00000459004 134 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AP001086.1-201ENST00000494882 321 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AP002812.1-201ENST00000495378 474 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AC091885.1-201ENST00000506658 268 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 RNA5SP73-201ENST00000516744 108 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 RNU7-30P-201ENST00000516835 62 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 RNU6-1314P-201ENST00000517139 104 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 RANP9-201ENST00000519957 271 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AC002545.1-201ENST00000592511 181 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 C8orf59P2-201ENST00000603441 271 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AC112487.2-201ENST00000637950 304 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AL137003.2-201ENST00000606924 2538 ntBASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC163A0A0D9SF12 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 Y_RNA.263-201ENST00000364659 114 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 RNU6-14P-201ENST00000384630 106 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 MIR659-201ENST00000384963 97 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 MT-TD-201ENST00000387419 68 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL583835.1-201ENST00000399570 407 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 RNA5SP317-201ENST00000410176 116 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 RNA5SP311-201ENST00000411290 116 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 NDUFB4P5-201ENST00000415445 361 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL591212.2-201ENST00000433923 257 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 IFNA20P-201ENST00000436840 528 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 UBE2V1P7-201ENST00000446395 340 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL121877.1-201ENST00000453704 622 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 SNORA84-201ENST00000459229 133 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AC083904.1-201ENST00000487828 231 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 RNA5SP315-201ENST00000516340 116 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 Y_RNA.675-201ENST00000516389 149 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 RNA5SP312-201ENST00000517068 116 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 RPL7P20-201ENST00000520308 745 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL137161.1-201ENST00000532231 390 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL121576.1-201ENST00000556055 276 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AC037471.2-201ENST00000564941 598 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL591034.3-201ENST00000605511 685 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AP002826.1-201ENST00000608835 315 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AP001486.3-201ENST00000615334 372 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL357559.1-201ENST00000622228 274 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AL359697.1-201ENST00000624879 587 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AP000542.2-201ENST00000623199 6179 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CCDC163A0A0D9SF12 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms