Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
COMMD3-BMI1R4GMX3 AC022336.2-201ENST00000568966 2538 ntBASIC2.54□□□□□ -2
COMMD3-BMI1R4GMX3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
COMMD3-BMI1R4GMX3 Z82209.1-201ENST00000422141 2135 ntBASIC2.54□□□□□ -2
COMMD3-BMI1R4GMX3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC005832.2-201ENST00000538921 1430 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 RNA5SP374-201ENST00000362939 125 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 RNU6-525P-201ENST00000363685 104 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 SNORA38.1-201ENST00000364172 131 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AF274854.1-201ENST00000413236 615 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 CCDC58P2-201ENST00000417131 366 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC019178.2-201ENST00000423595 505 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC092634.2-201ENST00000428146 1010 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 GTF2IP20-201ENST00000431663 360 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 MRPL42P4-201ENST00000453267 443 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 RNU7-26P-201ENST00000458980 63 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 HSPE1P6-201ENST00000479457 291 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC010460.2-201ENST00000509054 677 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC123904.3-201ENST00000547218 814 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 CYB5AP5-201ENST00000549779 389 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AL356280.1-201ENST00000603614 379 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC087821.2-201ENST00000637086 450 ntBASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.53□□□□□ -2
COMMD3-BMI1R4GMX3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 U8.8-201ENST00000365399 135 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 RNU6-1300P-201ENST00000391046 108 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 MTCO3P30-201ENST00000426425 670 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC093156.1-201ENST00000440382 670 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 BMI1P1-201ENST00000445879 941 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 NIPA2P5-201ENST00000452282 464 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC133134.1-201ENST00000466800 359 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC023424.2-201ENST00000493479 777 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 TTC39CP1-201ENST00000512513 755 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC124947.2-202ENST00000552735 133 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 ZNF861P-201ENST00000588126 639 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 AP001521.1-201ENST00000609150 300 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 U6.101-201ENST00000637707 76 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 MIR7515-201ENST00000637837 67 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC080100.1-201ENST00000624239 5356 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 CCT4P2-201ENST00000233836 1548 ntBASIC2.52□□□□□ -2.01
COMMD3-BMI1R4GMX3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC096644.4-201ENST00000563417 2912 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 RNU5B-4P-201ENST00000363508 111 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 RN7SKP226-201ENST00000364912 300 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 RNU6-76P-201ENST00000384060 104 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 RPS7P9-201ENST00000414704 586 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 DPRXP1-201ENST00000426312 460 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 AL512649.1-201ENST00000428997 581 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 COX6CP12-201ENST00000446748 202 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 MTCYBP11-201ENST00000447254 1109 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 MTCO3P27-201ENST00000514397 196 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC104417.1-201ENST00000523974 751 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 AP001189.2-201ENST00000527320 189 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 OR5BN1P-201ENST00000532955 829 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 AC007115.1-201ENST00000546853 234 ntBASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.51□□□□□ -2.01
COMMD3-BMI1R4GMX3 GTF2IP8-201ENST00000560687 584 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms