Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AP005205.1-201ENST00000563503 508 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 SNRPGP15-201ENST00000600149 222 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 MIR486-1-201ENST00000612171 68 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC114781.5-201ENST00000615297 108 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC015967.1-201ENST00000619893 476 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC011944.2-201ENST00000624440 683 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC004925.1-201ENST00000624256 2706 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 Y_RNA.38-201ENST00000362617 102 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-867P-201ENST00000364956 107 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 Y_RNA.367-201ENST00000365544 101 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-1074P-201ENST00000383995 104 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 MIR454-201ENST00000390180 115 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 RNU2-39P-201ENST00000410604 198 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 HSPE1P12-201ENST00000412576 301 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AL139413.1-201ENST00000421309 217 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC083863.1-201ENST00000438811 231 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 SEPT14P3-201ENST00000439401 183 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 HMGB1P37-201ENST00000439613 609 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 BNIP3P2-201ENST00000441221 577 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC016691.1-201ENST00000441321 413 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AL732372.2-207ENST00000445840 183 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 HMGN2P21-201ENST00000447764 270 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 SEPT14P2-201ENST00000453405 183 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC008481.1-201ENST00000463278 396 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 SEPT14P4-201ENST00000513445 186 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 FO082796.1-201ENST00000523795 183 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC020914.4-201ENST00000597690 277 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AC025946.2-201ENST00000603398 234 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 AL020991.1-201ENST00000612314 373 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 MIR8059-201ENST00000620427 81 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 MIR6810-201ENST00000622701 70 ntBASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHA3Q9Y5H8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 TAB3P1-202ENST00000452645 1634 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 MIR383-201ENST00000362257 73 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 RNY3P3-201ENST00000363816 102 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 SNORA23-201ENST00000365128 182 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 RNA5SP235-201ENST00000365411 114 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 SNORA69-201ENST00000383895 132 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AL359634.1-202ENST00000404721 284 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 RAC1P3-201ENST00000416129 580 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 EI24P1-201ENST00000416584 867 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 MTCO1P39-201ENST00000426148 480 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 USP12PX-201ENST00000432383 1057 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 MTATP6P16-201ENST00000434543 526 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AL645939.1-201ENST00000453429 797 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 RPS27AP13-201ENST00000498403 237 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 HMGB1P22-201ENST00000505315 124 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms