Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC060780.3-201ENST00000589464 80 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AC015813.4-201ENST00000610469 179 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 AL359547.2-201ENST00000615810 418 ntBASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA9Q9Y5G4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC011266.1-201ENST00000624119 3569 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 NACAP2-201ENST00000318548 624 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU6-1287P-201ENST00000362914 107 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 SNORD115-7-201ENST00000365306 82 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 RNA5SP366-201ENST00000365454 123 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU6-1029P-201ENST00000384109 107 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU6-1060P-201ENST00000384664 107 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 MIR514A1-201ENST00000385133 98 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 SNORD37.1-201ENST00000390968 65 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 SOD2P1-201ENST00000396543 562 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AL136116.1-201ENST00000403591 381 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AL445189.1-201ENST00000405722 338 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 HDGFP1-201ENST00000405943 252 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 OR6C66P-201ENST00000414917 930 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 TMSB10P2-201ENST00000416049 131 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AL121877.1-201ENST00000453704 622 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 SNRPGP5-201ENST00000456003 220 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 RPS29P15-201ENST00000458329 171 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC087588.1-201ENST00000462203 316 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 UQCRHP4-201ENST00000471686 272 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 RPL23AP11-201ENST00000475260 469 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC233702.1-201ENST00000482905 502 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 SNORA31.3-201ENST00000516029 96 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU2-58P-201ENST00000516403 183 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 SNORA31.9-201ENST00000516429 84 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 RN7SKP219-201ENST00000516825 296 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 RN7SKP60-201ENST00000516985 239 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 NRON-201ENST00000517270 370 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AP003730.1-201ENST00000524605 285 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 MIR4703-201ENST00000577728 79 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC015917.1-201ENST00000579654 510 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 ARF4P1-201ENST00000605447 541 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 MIR3653-201ENST00000625572 110 ntBASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA9Q9Y5G4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU6-451P-201ENST00000362921 107 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 Y_RNA.157-201ENST00000363638 102 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 Y_RNA.381-201ENST00000365666 102 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 MIR659-201ENST00000384963 97 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 MIR921-201ENST00000401133 56 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 ARL4AP5-201ENST00000404372 599 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU4-46P-201ENST00000410818 138 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 RPL23AP26-201ENST00000412728 464 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 VDAC1P9-201ENST00000412766 841 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 AL109913.1-201ENST00000421173 514 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 NDUFB4P7-201ENST00000423198 363 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 AC069285.2-201ENST00000440210 275 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 RPL23AP93-201ENST00000440847 484 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 PHBP16-201ENST00000446318 950 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 FABP5P13-201ENST00000452144 328 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 CACYBPP2-201ENST00000453625 678 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 VN1R17P-201ENST00000472048 1090 ntBASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHGA9Q9Y5G4 AC104806.1-201ENST00000508720 308 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms