Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 GNG5P1-201ENST00000255500 204 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 RNU6-213P-201ENST00000384051 104 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 RNU6-1103P-201ENST00000384150 107 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 RPS3AP36-201ENST00000398190 775 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 CCNG1P1-201ENST00000406783 885 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 MIR1193-201ENST00000408109 78 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC245052.5-201ENST00000416320 649 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 MTCYBP5-201ENST00000423752 1135 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AL117339.2-201ENST00000430475 180 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC073614.1-201ENST00000438690 650 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 RABEPKP1-201ENST00000440529 1026 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AP1S2P1-201ENST00000457344 379 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 RPS20P24-201ENST00000457473 361 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 snoU109.4-201ENST00000458953 143 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 RPS4XP10-201ENST00000465034 731 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC021382.1-201ENST00000483523 359 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC055855.1-201ENST00000489563 579 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 PCBP2P3-201ENST00000509726 843 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC017037.2-201ENST00000513850 890 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 Y_RNA.672-201ENST00000516289 104 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 SCARNA14-201ENST00000516903 136 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 RNU6-352P-201ENST00000516908 107 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 RN7SKP60-201ENST00000516985 239 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 SETP7-201ENST00000552169 453 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC107954.1-201ENST00000565906 727 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AL359999.1-201ENST00000604513 294 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 RNU6-87P-201ENST00000607561 108 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 OR10AB1P-201ENST00000609613 938 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 BX664608.1-201ENST00000610519 487 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC024941.1-201ENST00000612250 334 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 U4.5-201ENST00000617137 123 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC068831.8-201ENST00000620171 435 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AL356585.4-201ENST00000623078 1229 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AL732618.1-201ENST00000623251 301 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC040168.1-201ENST00000623594 991 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC068880.5-201ENST00000624331 290 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC124864.2-201ENST00000624736 186 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AL157786.1-207ENST00000627771 695 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 MIR7153-201ENST00000637758 57 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AC009902.3-201ENST00000606235 2172 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 AP001350.1-201ENST00000601906 1524 ntBASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MRPS28Q9Y2Q9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 RNY4P34-201ENST00000364779 95 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 MIR591-201ENST00000385290 95 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 CALM2P3-201ENST00000400429 449 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 RN7SKP285-201ENST00000410137 318 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 SPA17P1-201ENST00000416656 452 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 BX295541.1-201ENST00000417774 250 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 RPL21P66-201ENST00000426566 466 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 AL358934.1-201ENST00000432346 324 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 OR4C10P-201ENST00000434991 931 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 AC104850.1-201ENST00000435940 476 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 UBE2V1P8-201ENST00000437166 265 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 MTATP6P13-201ENST00000438531 667 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 AC108734.1-201ENST00000439549 399 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 AL359385.1-201ENST00000456509 365 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 FCF1P3-201ENST00000496394 590 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 RN7SKP289-201ENST00000517244 295 ntBASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.11□□□□□ -1.91
MRPS28Q9Y2Q9 CYCSP30-201ENST00000546447 172 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms