Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU6-97P-201ENST00000363387 104 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 RNU6-723P-201ENST00000383973 107 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AL360182.1-201ENST00000397433 468 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AL136372.1-201ENST00000403060 228 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 RPS15AP38-201ENST00000413110 372 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 HMGN2P16-201ENST00000456802 261 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 CEACAMP4-201ENST00000457676 421 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 SNRPGP3-201ENST00000469405 227 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 Y_RNA.673-201ENST00000516306 88 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 RNU6-714P-201ENST00000516963 103 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC090281.1-201ENST00000523019 276 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC015871.2-201ENST00000603605 948 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC072039.2-201ENST00000608883 439 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 RMST_8.1-201ENST00000610287 165 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC087683.2-201ENST00000611384 326 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC095031.1-201ENST00000623685 672 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AP003122.5-201ENST00000527668 3766 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 SNORA9.2-201ENST00000365361 133 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AL022400.1-201ENST00000423946 935 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 ISCA1P2-201ENST00000438679 421 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 SNORD121B-201ENST00000458838 81 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 TRBV12-1-201ENST00000479785 344 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 RNA5SP24-201ENST00000516478 95 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC079600.2-201ENST00000550076 130 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AC012531.5-201ENST00000611375 151 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 AL450489.1-201ENST00000612071 468 ntBASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.64□□□□□ -1.51
SHROOM4Q9ULL8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 MAPK10-362ENST00000641864 4484 ntBASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 AC087359.1-201ENST00000508335 1740 ntBASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 RNU6-1207P-201ENST00000384343 107 ntBASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 UBE2V1P13-201ENST00000436983 439 ntBASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 AL603825.1-201ENST00000438481 80 ntBASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 LINC00888-204ENST00000487386 421 ntBASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 AC107016.2-201ENST00000547968 190 ntBASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 SYF2P1-201ENST00000550658 413 ntBASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 AC011468.4-201ENST00000603942 409 ntBASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 AC009159.2-201ENST00000617603 606 ntBASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.63□□□□□ -1.51
SHROOM4Q9ULL8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 MIR135A2-201ENST00000384854 100 ntBASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 AC079780.1-201ENST00000428259 207 ntBASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 MTCO1P27-201ENST00000448269 226 ntBASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 MTND1P9-201ENST00000453775 944 ntBASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 AC021146.5-201ENST00000503544 545 ntBASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 HMGB3P15-201ENST00000507326 574 ntBASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 AC117522.3-201ENST00000507974 584 ntBASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 MIR5047-201ENST00000579212 100 ntBASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC5.62□□□□□ -1.51
SHROOM4Q9ULL8 AC092447.10-201ENST00000620607 1652 ntBASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 RNA5SP88-201ENST00000365560 109 ntBASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 MYL8P-204ENST00000431574 518 ntBASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 RAC1P7-201ENST00000445367 377 ntBASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 AP001025.2-201ENST00000490908 477 ntBASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 AC068305.1-201ENST00000497406 726 ntBASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 AC105914.1-201ENST00000511798 226 ntBASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 AC008549.1-201ENST00000512900 643 ntBASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 AL355493.4-201ENST00000618530 292 ntBASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.61□□□□□ -1.51
SHROOM4Q9ULL8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms