Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 RPL7P46-201ENST00000425129 740 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 RNU7-180P-201ENST00000459240 63 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 RPL21P8-201ENST00000465083 535 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 RPL7P19-201ENST00000469948 618 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC012158.1-204ENST00000483430 465 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 RNU7-30P-201ENST00000516835 62 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC107953.1-201ENST00000522216 297 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 ERHP1-201ENST00000523006 310 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AL137161.1-201ENST00000532231 390 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC011611.1-201ENST00000552179 197 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC020634.1-201ENST00000608701 549 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC015967.1-201ENST00000619893 476 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 RMST_9.1-201ENST00000619945 193 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC112487.2-201ENST00000637950 304 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 TPTE2P4-201ENST00000258589 1605 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
DDX41Q9UJV9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AC103710.2-202ENST00000641454 2853 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 Y_RNA.813-201ENST00000364639 102 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 RNA5SP235-201ENST00000365411 114 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 Y_RNA.373-201ENST00000365600 103 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 SMIM11P1-201ENST00000369586 178 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 Y_RNA.535-201ENST00000384612 99 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 RNU6-1011P-201ENST00000384668 107 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 TMSB10P2-201ENST00000416049 131 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AC008850.1-201ENST00000427546 362 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 NEFMP1-201ENST00000443423 1006 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AL590639.1-201ENST00000456484 337 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AC010618.1-201ENST00000469924 477 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 RPL23AP65-201ENST00000475608 468 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 MLLT10P2-201ENST00000506434 249 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 KLHL2P1-201ENST00000508691 521 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 PPBPP1-201ENST00000510807 373 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AC015795.1-201ENST00000513669 327 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 RNU6-352P-201ENST00000516908 107 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 MIR3138-201ENST00000585238 82 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AC007687.1-201ENST00000602704 304 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AL121757.2-201ENST00000611223 313 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AL390240.1-201ENST00000612950 384 ntBASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
DDX41Q9UJV9 AP004289.2-201ENST00000444413 1457 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC016588.2-201ENST00000632484 3021 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 A2MP1-204ENST00000566278 4130 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AL592114.1-201ENST00000403842 483 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 RPL30P2-201ENST00000414021 291 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC018630.2-202ENST00000422992 927 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 RPS29P17-201ENST00000430795 166 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AC024082.2-201ENST00000434771 238 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 TAAR7P-201ENST00000436141 242 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AL359073.1-201ENST00000448036 403 ntBASIC5.13□□□□□ -1.59
DDX41Q9UJV9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms