Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 SNORA31.22-201ENST00000517204 135 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 RNU6-711P-201ENST00000517255 106 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC093331.1-201ENST00000521474 169 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC025588.2-201ENST00000604851 466 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC004067.1-201ENST00000608733 700 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AP000254.1-201ENST00000609934 520 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AL139418.1-201ENST00000613613 177 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC018816.2-201ENST00000621460 353 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC092628.2-201ENST00000622492 339 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC009039.2-201ENST00000624524 529 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC096644.4-201ENST00000563417 2912 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AP000526.1-201ENST00000603308 1388 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 ZNF542P-204ENST00000482727 1305 ntBASIC2.96□□□□□ -1.93
LHX3Q9UBR4 AC005183.1-201ENST00000603687 1979 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 RNU6-931P-201ENST00000363850 107 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 SNORA1.3-201ENST00000384676 136 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 RPL21P3-201ENST00000395517 478 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 PPP1R11P2-201ENST00000423543 382 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AC022018.1-201ENST00000430685 241 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 NDUFB4P6-201ENST00000436819 366 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 UBE2V1P13-201ENST00000436983 439 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AL590664.1-201ENST00000448065 339 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AL162389.1-201ENST00000449233 177 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 RPL36AP33-201ENST00000450395 310 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AC146507.2-201ENST00000460608 476 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 RPS27P29-201ENST00000463110 252 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 RPL30P14-201ENST00000482744 348 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AC147055.4-201ENST00000504399 745 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AC093809.1-201ENST00000509155 340 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AC011260.1-201ENST00000578420 472 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 VN1R92P-201ENST00000598511 928 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AC234772.3-201ENST00000602277 528 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AL031281.1-201ENST00000604049 488 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 TUSC7.1-201ENST00000610969 165 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AL450489.1-201ENST00000612071 468 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AL159972.1-201ENST00000625150 448 ntBASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.96□□□□□ -1.94
LHX3Q9UBR4 AC012321.1-201ENST00000561622 1588 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 SNORA9.2-201ENST00000365361 133 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 RNU6-637P-201ENST00000384050 107 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 RNU6-114P-201ENST00000384704 105 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 MTCO1P17-201ENST00000411522 491 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 TPMTP3-201ENST00000411928 735 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 USP9YP36-201ENST00000424581 829 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 FTH1P1-201ENST00000437933 532 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 HSPE1P6-201ENST00000479457 291 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AC104685.1-201ENST00000502445 371 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AC083906.5-201ENST00000503722 328 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 RN7SKP43-201ENST00000516173 320 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AL354943.1-201ENST00000572103 781 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AC135507.2-201ENST00000612443 309 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AC009268.2-201ENST00000621925 457 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 MIR4275-201ENST00000636486 87 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 AC103706.2-201ENST00000638080 240 ntBASIC2.95□□□□□ -1.94
LHX3Q9UBR4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms