Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AL139413.1-201ENST00000421309 217 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 RPL35AP22-201ENST00000436855 335 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 AL831737.1-201ENST00000441288 271 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 TRGVB-201ENST00000453257 471 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 ANKRD26P4-201ENST00000455755 950 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 RPL21P99-201ENST00000480369 423 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 OR4G11P-201ENST00000492842 939 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 AC034222.1-201ENST00000494052 532 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 AC104090.1-201ENST00000506341 1171 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 AC135507.1-201ENST00000607214 561 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 AL627230.6-201ENST00000611129 280 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 AL449363.1-201ENST00000617815 186 ntBASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
COMMD3Q9UBI1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AL390862.1-201ENST00000635467 1469 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 RN7SKP226-201ENST00000364912 300 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 RNU1-73P-201ENST00000383971 164 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AL031679.1-201ENST00000400616 525 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AL122016.1-201ENST00000403365 367 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AL024474.1-201ENST00000404655 591 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AL450338.1-201ENST00000407987 512 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 Z92545.1-201ENST00000411782 234 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 LINC01347-201ENST00000417964 355 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 RNF19BPX-201ENST00000426224 625 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 FGF7P5-201ENST00000441829 291 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AC009237.8-201ENST00000445492 379 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 HMGN1P5-201ENST00000448591 263 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 RNU7-23P-201ENST00000459465 62 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 RNU6-491P-201ENST00000516099 110 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 SNORA31.23-201ENST00000517219 133 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AC008676.3-201ENST00000521237 435 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 MIR3618-201ENST00000580330 88 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AC005498.1-201ENST00000592125 465 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AC012669.1-201ENST00000603209 283 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AC103710.4-201ENST00000609301 899 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AL162233.1-201ENST00000620014 944 ntBASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.59□□□□□ -2.15
COMMD3Q9UBI1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
COMMD3Q9UBI1 AP006437.1-201ENST00000641440 3685 ntBASIC1.59□□□□□ -2.16
COMMD3Q9UBI1 AC046144.1-201ENST00000478559 1853 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 U3.12-201ENST00000364498 214 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 RNU6-1197P-201ENST00000391183 107 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 RPS4XP8-201ENST00000402039 771 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 BZW1P2-201ENST00000473537 826 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 AC004924.1-201ENST00000480160 781 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 COL6A4P2-205ENST00000509855 506 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 MRPS17P9-201ENST00000511924 393 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 AC022616.2-201ENST00000523185 300 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 AP001317.1-201ENST00000531194 960 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 AC115989.2-201ENST00000578640 563 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 AC138473.1-201ENST00000605717 526 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 AP002826.1-201ENST00000608835 315 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 OR10AB1P-201ENST00000609613 938 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 AC103710.1-201ENST00000610003 901 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 AC012150.2-201ENST00000621300 544 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 YWHAEP7-203ENST00000622054 312 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 U6.107-201ENST00000637108 79 ntBASIC1.58□□□□□ -2.16
COMMD3Q9UBI1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms