Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 RNU6-660P-201ENST00000364566 109 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 MIR19A-201ENST00000384878 82 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 U8.14-201ENST00000390843 143 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AC063979.1-201ENST00000415539 377 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AL593851.1-201ENST00000426171 157 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AC005019.1-201ENST00000436455 431 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 CBWD4P-201ENST00000445695 655 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 PRDX3P3-201ENST00000447765 522 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AC140076.1-201ENST00000449897 361 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 RPS20P22-201ENST00000473700 357 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 OR5BM1P-201ENST00000512021 366 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 LRRC34P1-201ENST00000542742 915 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AC090616.2-202ENST00000584248 222 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 OR5H6-203ENST00000642105 978 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 AC007785.2-201ENST00000598627 1916 ntBASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
BLOC1S4Q9NUP1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AL049641.1-201ENST00000441055 1948 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 MTCO1P12-201ENST00000414273 1543 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 RNU1-75P-201ENST00000347264 129 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 RNU6-501P-201ENST00000364072 100 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AL513331.1-201ENST00000411908 397 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 RPS7P13-201ENST00000413955 498 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AC005005.2-201ENST00000420779 380 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AL512844.2-201ENST00000433990 593 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 CYCSP35-201ENST00000451978 304 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 HMGN1P18-201ENST00000457642 277 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AC091153.1-201ENST00000466297 402 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 SETP11-201ENST00000473027 690 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AC055855.1-201ENST00000489563 579 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 OR2A20P-203ENST00000498397 1268 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 RNU6-1003P-201ENST00000517099 105 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AC104027.1-201ENST00000521887 300 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AL606834.2-201ENST00000602954 668 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AL162713.1-201ENST00000604480 262 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 OR10AB1P-201ENST00000609613 938 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 AC097655.1-201ENST00000635075 318 ntBASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BLOC1S4Q9NUP1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
BLOC1S4Q9NUP1 Z83843.1-201ENST00000604070 3685 ntBASIC3.65□□□□□ -1.82
BLOC1S4Q9NUP1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AP000568.1-201ENST00000282964 442 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 RNU5A-8P-201ENST00000364102 114 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 MIR670-201ENST00000390142 98 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 RN7SKP140-201ENST00000411196 284 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 RPL21P24-201ENST00000413752 448 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AL389915.1-201ENST00000422463 466 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AC005300.1-201ENST00000428401 373 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 RPL23AP69-201ENST00000431134 458 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 FTH1P1-201ENST00000437933 532 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 VN1R34P-201ENST00000447387 883 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 RPL30P6-201ENST00000475925 342 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 RPL21P129-201ENST00000491732 478 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 APOOP4-201ENST00000513530 597 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AC100870.1-201ENST00000522035 505 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AC002545.1-201ENST00000592511 181 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 NIFKP6-201ENST00000598115 845 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AP000403.1-201ENST00000603349 851 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AC018638.7-201ENST00000605836 1114 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AC026790.2-201ENST00000606282 430 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AC090970.3-201ENST00000612566 866 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 406.3 ms