Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 RNU4-66P-201ENST00000365199 138 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 RNU6-1105P-201ENST00000384774 107 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 SSXP10-201ENST00000402595 565 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 EIF4A1P3-201ENST00000411521 244 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AC069218.2-201ENST00000411665 344 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 RPL7L1P10-201ENST00000427790 463 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 CEACAMP1-201ENST00000434624 1035 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 HSFY6P-201ENST00000445573 403 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 Z95327.1-201ENST00000446082 482 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 RNU6-1208P-201ENST00000459588 107 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 RPS4XP10-201ENST00000465034 731 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 PLGLA-201ENST00000465668 449 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AC034236.1-201ENST00000469891 373 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 RPL23AP2-201ENST00000471227 466 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AC116562.3-201ENST00000506136 177 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AL592156.1-201ENST00000508758 304 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AC068587.5-201ENST00000528506 175 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AC034105.4-201ENST00000568304 277 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 COX6CP3-201ENST00000580869 223 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AL592436.1-201ENST00000605135 558 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AC084781.2-201ENST00000615568 161 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 MTND4LP32-201ENST00000636111 270 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 TAB3P1-202ENST00000452645 1634 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 ELL2P4-201ENST00000446870 1376 ntBASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AL122126.1-201ENST00000546905 1318 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 SNORA22B-201ENST00000383876 138 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 Y_RNA.459-201ENST00000384251 102 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 PPIAP31-201ENST00000405422 495 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AL606923.1-201ENST00000406616 190 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 RNU2-39P-201ENST00000410604 198 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 RNU4-14P-201ENST00000410858 122 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 OR6C66P-201ENST00000414917 930 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 PMCHL1-202ENST00000423102 261 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AC092013.1-201ENST00000438795 332 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AL137792.2-201ENST00000443484 235 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 ABCF2P2-201ENST00000450549 296 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AL354710.1-201ENST00000453641 246 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AL132838.2-201ENST00000492041 314 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 RNU2-10P-201ENST00000516375 211 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 RNU6-1046P-201ENST00000516538 107 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AC103843.2-201ENST00000530523 682 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AP000889.2-201ENST00000532684 490 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AC093012.1-202ENST00000549403 582 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 SNRPGP18-201ENST00000553000 214 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AL358913.1-201ENST00000554342 121 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 SULT1C2P2-201ENST00000562517 294 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 MIR4703-201ENST00000577728 79 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 BNIP3P25-201ENST00000596023 559 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AC245389.1-201ENST00000605141 529 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 AL132822.1-201ENST00000617063 513 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 uc_338.22-201ENST00000622722 187 ntBASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
BCAS3Q9H6U6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms