Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.4□□□□□ -1.54
CNTNAP3Q9BZ76 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
CNTNAP3Q9BZ76 AP006289.1-201ENST00000538089 277 ntBASIC5.4□□□□□ -1.54
CNTNAP3Q9BZ76 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.4□□□□□ -1.54
CNTNAP3Q9BZ76 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.4□□□□□ -1.54
CNTNAP3Q9BZ76 AL360012.1-201ENST00000602813 131 ntBASIC5.4□□□□□ -1.54
CNTNAP3Q9BZ76 AC006254.2-201ENST00000603259 279 ntBASIC5.4□□□□□ -1.54
CNTNAP3Q9BZ76 SNHG22-203ENST00000617833 660 ntBASIC5.4□□□□□ -1.54
CNTNAP3Q9BZ76 AC087385.3-201ENST00000620477 187 ntBASIC5.4□□□□□ -1.54
CNTNAP3Q9BZ76 CYP4F35P-202ENST00000636121 390 ntBASIC5.4□□□□□ -1.54
CNTNAP3Q9BZ76 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP3Q9BZ76 AC232271.1-201ENST00000602455 2715 ntBASIC5.4□□□□□ -1.55
CNTNAP3Q9BZ76 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CNTNAP3Q9BZ76 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP3Q9BZ76 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP3Q9BZ76 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP3Q9BZ76 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 PHKBP1-201ENST00000450951 1951 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 RNU6-595P-201ENST00000363944 107 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 MIR134-201ENST00000385258 73 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 SNORD73A-201ENST00000386062 65 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 RNU6-700P-201ENST00000391043 107 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AL139039.1-201ENST00000401900 692 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 SNORA11.1-201ENST00000408133 129 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 DPPA2P2-201ENST00000418220 897 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 MTCO1P39-201ENST00000426148 480 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 RAB28P5-201ENST00000427490 651 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AL159987.2-201ENST00000432754 307 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AC010655.1-201ENST00000449336 292 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 snoU109.4-201ENST00000458953 143 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 Y_RNA.638-201ENST00000459374 113 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AC021678.3-201ENST00000517893 476 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 EDDM3DP-201ENST00000554692 434 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 MIR4679-2-201ENST00000578358 77 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 MIR4429-201ENST00000580105 73 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 MIR4308-201ENST00000580634 81 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 MIR5096-201ENST00000583713 70 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AC012119.1-201ENST00000603184 222 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AC098826.3-201ENST00000603823 466 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 FP236240.3-201ENST00000623061 327 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 AC097372.5-201ENST00000623665 376 ntBASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3Q9BZ76 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AC005725.1-201ENST00000577346 2607 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 SNORA63.4-201ENST00000362763 126 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 RNU4-90P-201ENST00000362773 141 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 U3.13-201ENST00000364804 214 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 GNG5P2-201ENST00000372054 207 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 SNORA57.1-201ENST00000391227 145 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AL079342.1-201ENST00000401460 267 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 COX6B1P1-201ENST00000415962 213 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 CEACAMP1-201ENST00000434624 1035 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AC073264.2-201ENST00000448886 166 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AC234775.1-201ENST00000454247 670 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AURKAPS2-201ENST00000454983 333 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 PPIAP21-201ENST00000464473 501 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 HMGN2P13-201ENST00000476476 274 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 RPL30P1-201ENST00000488676 339 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AC113155.1-201ENST00000511141 769 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AC004980.4-201ENST00000513375 203 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AP006245.1-201ENST00000522549 120 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 MIR3160-1-201ENST00000577972 85 ntBASIC5.38□□□□□ -1.55
CNTNAP3Q9BZ76 MIR5696-201ENST00000578474 85 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms