Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.48□□□□□ -2.01
FOXC2Q99958 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.48□□□□□ -2.01
FOXC2Q99958 HMGB1P14-201ENST00000557424 591 ntBASIC2.48□□□□□ -2.01
FOXC2Q99958 ACTR3BP3-201ENST00000565577 979 ntBASIC2.48□□□□□ -2.01
FOXC2Q99958 CYCSP39-201ENST00000565821 309 ntBASIC2.48□□□□□ -2.01
FOXC2Q99958 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.48□□□□□ -2.01
FOXC2Q99958 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.48□□□□□ -2.01
FOXC2Q99958 AL133507.1-201ENST00000605269 557 ntBASIC2.48□□□□□ -2.01
FOXC2Q99958 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.48□□□□□ -2.01
FOXC2Q99958 AL138478.1-201ENST00000612252 832 ntBASIC2.48□□□□□ -2.01
FOXC2Q99958 AC025588.4-201ENST00000615802 908 ntBASIC2.48□□□□□ -2.01
FOXC2Q99958 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.48□□□□□ -2.01
FOXC2Q99958 AC010680.1-201ENST00000590024 3590 ntBASIC2.48□□□□□ -2.01
FOXC2Q99958 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
FOXC2Q99958 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
FOXC2Q99958 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
FOXC2Q99958 RNU6-859P-201ENST00000362728 107 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
FOXC2Q99958 MIR9-1-201ENST00000385198 89 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 RPL32P35-201ENST00000415214 394 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AL356320.2-201ENST00000417263 507 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AC003685.2-201ENST00000422795 395 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXC2Q99958 GTF2IP3-201ENST00000433887 494 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 HMGB3P11-201ENST00000440127 604 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.47□□□□□ -2.01
FOXC2Q99958 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.47□□□□□ -2.01
FOXC2Q99958 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXC2Q99958 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXC2Q99958 RPS20P22-201ENST00000473700 357 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 TMEM251P1-201ENST00000503717 318 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXC2Q99958 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXC2Q99958 RNU6-798P-201ENST00000516912 103 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 SCARNA1-201ENST00000517138 166 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AC022861.1-201ENST00000522981 663 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.47□□□□□ -2.01
FOXC2Q99958 AP000873.5-201ENST00000533906 236 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
FOXC2Q99958 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
FOXC2Q99958 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
FOXC2Q99958 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXC2Q99958 MAGOH2P-202ENST00000584384 429 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AC245884.10-201ENST00000597355 337 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 U73023.1-201ENST00000603134 700 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AL596245.1-201ENST00000618994 362 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AC123767.1-202ENST00000620407 817 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AC091903.1-201ENST00000624322 454 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AC010608.3-201ENST00000625048 527 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AC073476.4-201ENST00000628409 72 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXC2Q99958 AC013437.2-201ENST00000639587 677 ntBASIC2.47□□□□□ -2.01
FOXC2Q99958 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
FOXC2Q99958 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXC2Q99958 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
FOXC2Q99958 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
FOXC2Q99958 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
FOXC2Q99958 AP005901.5-201ENST00000545779 1796 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 ASNSP3-201ENST00000451989 1306 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
FOXC2Q99958 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
FOXC2Q99958 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
FOXC2Q99958 MIR34A-201ENST00000385130 110 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
FOXC2Q99958 RNU2-52P-201ENST00000410680 190 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.46□□□□□ -2.02
FOXC2Q99958 SDCBPP3-201ENST00000419629 891 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.46□□□□□ -2.02
FOXC2Q99958 AC104332.2-201ENST00000429959 156 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 AC090774.1-201ENST00000435925 246 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 MTND2P20-201ENST00000440805 661 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 MTCO1P53-201ENST00000441633 699 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.46□□□□□ -2.02
FOXC2Q99958 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
FOXC2Q99958 snoU109.3-201ENST00000459477 145 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 AC114981.1-201ENST00000503897 678 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 AC114322.1-201ENST00000506771 926 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 MTCYBP16-201ENST00000509187 1129 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 RAC1P5-201ENST00000512182 576 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 RNA5SP217-201ENST00000515959 91 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 RNU6-276P-201ENST00000516114 96 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.46□□□□□ -2.02
FOXC2Q99958 OR5G4P-201ENST00000525251 760 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.46□□□□□ -2.02
FOXC2Q99958 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.46□□□□□ -2.02
FOXC2Q99958 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.46□□□□□ -2.02
FOXC2Q99958 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.46□□□□□ -2.02
FOXC2Q99958 MIR3912-201ENST00000577566 105 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.46□□□□□ -2.02
FOXC2Q99958 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.46□□□□□ -2.02
FOXC2Q99958 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.46□□□□□ -2.02
FOXC2Q99958 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.46□□□□□ -2.02
FOXC2Q99958 AC069304.2-201ENST00000605154 435 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 AC112220.2-201ENST00000605513 533 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 AC009237.15-201ENST00000610252 501 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 DUXAP10-204ENST00000612052 616 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 AL121895.2-201ENST00000619558 447 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.46□□□□□ -2.02
FOXC2Q99958 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.46□□□□□ -2.02
FOXC2Q99958 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms