Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 Z82190.1-201ENST00000454534 490 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 PABPC1P3-201ENST00000469174 459 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 RPS27P23-201ENST00000487608 251 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 HMGB1P47-201ENST00000511281 589 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 RN7SKP31-201ENST00000516354 278 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 MIR5571-201ENST00000577998 113 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AL355877.2-201ENST00000603670 358 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AC073308.1-201ENST00000623696 305 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AC091932.3-201ENST00000624223 323 ntBASIC1.56□□□□□ -2.16
AP1S3Q96PC3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
AP1S3Q96PC3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 ATF1P1-201ENST00000406040 927 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC018634.1-201ENST00000437554 401 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 RPS3AP12-201ENST00000443616 753 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AL136380.1-201ENST00000447970 162 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC147055.4-201ENST00000504399 745 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 SUMO2P6-201ENST00000505273 288 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC022447.3-201ENST00000506865 495 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 RNA5SP356-201ENST00000515972 94 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 SCARNA16.3-201ENST00000516595 184 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC021749.1-201ENST00000604322 607 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC135507.2-201ENST00000612443 309 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC109809.1-201ENST00000619665 545 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 CCT4P2-201ENST00000233836 1548 ntBASIC1.55□□□□□ -2.16
AP1S3Q96PC3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
AP1S3Q96PC3 AC010329.5-201ENST00000623497 2174 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
AP1S3Q96PC3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
AP1S3Q96PC3 RNU1-148P-201ENST00000384472 162 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 MIR649-201ENST00000384843 97 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 MIR676-201ENST00000390702 67 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 RNU6-882P-201ENST00000391025 103 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 CYCSP48-201ENST00000417124 323 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AL445685.2-201ENST00000422551 342 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.54□□□□□ -2.16
AP1S3Q96PC3 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 RPL35AP22-201ENST00000436855 335 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AL606490.8-201ENST00000441624 319 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AL109933.2-201ENST00000452651 260 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AC104164.3-201ENST00000467363 1258 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 HMGB3P17-201ENST00000504195 649 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AC093281.2-201ENST00000510153 597 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 MRPS17P9-201ENST00000511924 393 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.54□□□□□ -2.16
AP1S3Q96PC3 FAM92A1P1-201ENST00000528023 890 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.54□□□□□ -2.16
AP1S3Q96PC3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AC234778.2-201ENST00000566241 354 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AC010738.1-201ENST00000604970 987 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AL391597.1-201ENST00000618707 694 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 AC004520.1-201ENST00000608362 1413 ntBASIC1.54□□□□□ -2.16
AP1S3Q96PC3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
AP1S3Q96PC3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 GSTA9P-201ENST00000406231 611 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 RPL31P63-201ENST00000422565 375 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 ZNF833P-201ENST00000424938 1494 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AL451062.2-201ENST00000427515 271 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 RPL23AP83-201ENST00000434984 473 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 MTND1P33-201ENST00000446251 917 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AL672167.3-201ENST00000465951 960 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AL049714.1-201ENST00000466686 347 ntBASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.53□□□□□ -2.16
AP1S3Q96PC3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms