Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AL358934.1-201ENST00000432346 324 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC138Q96M89 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC138Q96M89 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC138Q96M89 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC138Q96M89 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC138Q96M89 RPL38P1-201ENST00000460914 211 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC138Q96M89 RN7SL432P-201ENST00000484057 298 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC138Q96M89 MTND2P33-201ENST00000506452 1031 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 RNU6-1256P-201ENST00000516539 103 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 RN7SKP258-201ENST00000517151 304 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 IGKV2-38-201ENST00000517443 247 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC138Q96M89 AC004024.1-201ENST00000549244 247 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 GLUD1P4-201ENST00000590914 418 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 AC104662.1-201ENST00000604448 511 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 AC103710.3-201ENST00000608157 948 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 MIR6716-201ENST00000613413 80 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 AC136475.10-201ENST00000620253 385 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC138Q96M89 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC138Q96M89 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC138Q96M89 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC138Q96M89 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC138Q96M89 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC138Q96M89 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 RNU6-1197P-201ENST00000391183 107 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC138Q96M89 NDUFS5P1-201ENST00000405668 289 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 SNORA3C-201ENST00000408792 125 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 RN7SKP33-201ENST00000410942 340 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 RN7SKP53-201ENST00000411337 315 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AL358472.1-201ENST00000431295 329 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 NDUFB4P6-201ENST00000436819 366 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 MTATP6P30-201ENST00000443540 664 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC009237.8-201ENST00000445492 379 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC138Q96M89 C1DP4-201ENST00000455429 424 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 PPIAP15-201ENST00000479662 484 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC091133.4-201ENST00000511142 308 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 RNU6-1092P-201ENST00000516955 87 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 HMGB1P41-201ENST00000520234 440 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 MRPL49P2-201ENST00000521066 465 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AP003072.2-201ENST00000527756 676 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 RPS3AP4-201ENST00000555161 764 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AL845331.3-202ENST00000562856 261 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC010546.1-201ENST00000569391 485 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 MIR5684-201ENST00000585074 65 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC093227.2-201ENST00000589357 285 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC002545.1-201ENST00000592511 181 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 BNIP3P22-201ENST00000593399 556 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AL136363.1-201ENST00000605349 337 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AC012557.2-201ENST00000605919 418 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 AP002360.4-201ENST00000606980 481 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 MIR7151-201ENST00000617477 60 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC138Q96M89 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC138Q96M89 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AF117829.1-206ENST00000621883 3802 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 ZNF807-201ENST00000328088 1707 ntBASIC3.98□□□□□ -1.77
CCDC138Q96M89 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC138Q96M89 AL137003.2-201ENST00000606924 2538 ntBASIC3.97□□□□□ -1.77
CCDC138Q96M89 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC138Q96M89 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC138Q96M89 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC138Q96M89 AC073343.1-201ENST00000328239 651 ntBASIC3.97□□□□□ -1.77
CCDC138Q96M89 SNORD35B-201ENST00000363660 87 ntBASIC3.97□□□□□ -1.77
CCDC138Q96M89 RNU6-960P-201ENST00000364056 120 ntBASIC3.97□□□□□ -1.77
CCDC138Q96M89 RNU6-701P-201ENST00000384059 107 ntBASIC3.97□□□□□ -1.77
CCDC138Q96M89 RNU6-39P-201ENST00000384344 107 ntBASIC3.97□□□□□ -1.77
CCDC138Q96M89 RNU6-328P-201ENST00000390887 106 ntBASIC3.97□□□□□ -1.77
CCDC138Q96M89 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC138Q96M89 TAAR7P-201ENST00000436141 242 ntBASIC3.97□□□□□ -1.77
CCDC138Q96M89 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.97□□□□□ -1.77
CCDC138Q96M89 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.97□□□□□ -1.77
CCDC138Q96M89 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms