Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 RPL7P34-201ENST00000433316 712 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 UBE2D3P1-201ENST00000436669 444 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC002381.1-201ENST00000447049 280 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 RPS20P24-201ENST00000457473 361 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC092798.1-201ENST00000458542 409 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 MEMO1P3-201ENST00000459811 302 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 RPL23AP11-201ENST00000475260 469 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 RPS29P2-201ENST00000479278 136 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC108043.1-201ENST00000512696 574 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 RPPH1-2P-201ENST00000516688 293 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 DUXAP5-201ENST00000529668 529 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LINC00477Q96M19 EEF1B2P4-201ENST00000551398 348 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC00477Q96M19 MIR5680-201ENST00000577577 84 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 MIR4446-201ENST00000578505 67 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 OR4K8P-201ENST00000578842 1048 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 UBL5P2-201ENST00000583788 219 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 BNIP3P11-201ENST00000603878 563 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AL137843.1-201ENST00000605078 385 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC245389.1-201ENST00000605141 529 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC112220.3-201ENST00000605502 502 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC106028.5-201ENST00000610332 395 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC097478.2-201ENST00000610572 514 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 TUSC7.1-201ENST00000610969 165 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC015967.1-201ENST00000619893 476 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC010338.1-201ENST00000621823 717 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AP000770.2-201ENST00000623694 100 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC231657.1-201ENST00000624313 397 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC007671.2-201ENST00000637344 619 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 OR4G11P-202ENST00000642116 1414 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AL513185.3-201ENST00000433335 1300 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC00477Q96M19 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 MIR627-201ENST00000384979 97 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 MIR670-201ENST00000390142 98 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AL356967.1-201ENST00000406305 431 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 USP9YP33-201ENST00000412220 421 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AL451074.5-201ENST00000415894 435 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 HMGB1P49-201ENST00000418882 569 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 USP9YP35-201ENST00000435696 412 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 RPL39P40-201ENST00000445481 146 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 Z75741.1-201ENST00000446793 314 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 MTND2P19-201ENST00000449129 1012 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 PRSS3P4-201ENST00000453323 162 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 RPL30P9-201ENST00000465586 330 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 KLRA1P-201ENST00000503499 986 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC118282.1-201ENST00000506408 765 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC093281.2-201ENST00000510153 597 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC017037.2-201ENST00000513850 890 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 RNU6-1129P-201ENST00000515964 104 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 SNORA67.7-201ENST00000516664 135 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC087465.1-201ENST00000560574 245 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC138761.3-201ENST00000579993 334 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 MIR4999-201ENST00000585029 91 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC083760.1-201ENST00000589621 670 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AL606834.2-201ENST00000602954 668 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC012119.1-201ENST00000603184 222 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 ELOCP35-201ENST00000604289 336 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC090115.4-201ENST00000609970 188 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AL020991.1-201ENST00000612314 373 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC012314.7-201ENST00000619693 93 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms