Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC107081.3-201ENST00000612715 2034 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 RNU6-28P-201ENST00000362378 107 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 RNU1-76P-201ENST00000362903 159 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 MIR517A-201ENST00000385001 87 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 U3.20-201ENST00000390909 217 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 RNU6-131P-201ENST00000391144 107 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 DBIP1-201ENST00000401435 260 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 RNU6-1135P-201ENST00000411083 103 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6□□□□□ -1.45
TRIM47Q96LD4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6□□□□□ -1.45
TRIM47Q96LD4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6□□□□□ -1.45
TRIM47Q96LD4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6□□□□□ -1.45
TRIM47Q96LD4 KNOP1P3-201ENST00000446933 426 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 HMGB1P4-201ENST00000455362 567 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6□□□□□ -1.45
TRIM47Q96LD4 AC108059.3-201ENST00000456388 214 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 AC091153.1-201ENST00000466297 402 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 Y_RNA.719-201ENST00000517156 106 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6□□□□□ -1.45
TRIM47Q96LD4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC6□□□□□ -1.45
TRIM47Q96LD4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6□□□□□ -1.45
TRIM47Q96LD4 SULT1C2P2-201ENST00000562517 294 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
TRIM47Q96LD4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6□□□□□ -1.45
TRIM47Q96LD4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6□□□□□ -1.45
TRIM47Q96LD4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6□□□□□ -1.45
TRIM47Q96LD4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6□□□□□ -1.45
TRIM47Q96LD4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6□□□□□ -1.45
TRIM47Q96LD4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM47Q96LD4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM47Q96LD4 BDP1P-201ENST00000582658 1990 ntBASIC6□□□□□ -1.45
TRIM47Q96LD4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM47Q96LD4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 MAPK10-263ENST00000641052 4307 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 RNU6-1325P-201ENST00000364905 105 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 SNORD115-46-201ENST00000390982 71 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 SNORD70.1-201ENST00000391007 85 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 RPS29P13-201ENST00000402041 169 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 RPL23AP36-201ENST00000413895 458 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 RPL7AP49-201ENST00000429522 581 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AL591438.1-201ENST00000433508 581 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 RPL23AP74-201ENST00000437246 471 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 COX6CP14-201ENST00000469580 174 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AC068305.1-201ENST00000497406 726 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 RNU2-31P-201ENST00000516954 155 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AC126177.3-201ENST00000551839 688 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AC009852.2-201ENST00000567898 485 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AC136624.4-201ENST00000573044 370 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AL020997.2-201ENST00000602607 184 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AC244107.2-201ENST00000611773 76 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.99□□□□□ -1.45
TRIM47Q96LD4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM47Q96LD4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM47Q96LD4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM47Q96LD4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
TRIM47Q96LD4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM47Q96LD4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM47Q96LD4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TRIM47Q96LD4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM47Q96LD4 RNY1P16-201ENST00000363063 111 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 Y_RNA.233-201ENST00000364407 101 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 RNA5SP428-201ENST00000365129 132 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 RNU6-214P-201ENST00000384130 107 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 Y_RNA.568-201ENST00000384742 113 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TRIM47Q96LD4 SNORA16.2-201ENST00000390991 127 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 AL024474.1-201ENST00000404655 591 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM47Q96LD4 AC010881.1-201ENST00000433830 235 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 RPL19P16-201ENST00000433839 588 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 RPL36AP6-201ENST00000435770 321 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 HSPD1P21-201ENST00000436541 245 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM47Q96LD4 AC112498.1-201ENST00000444401 332 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 RNU7-187P-201ENST00000458985 68 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 RNU7-167P-201ENST00000459160 62 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 RN7SL244P-201ENST00000493405 297 ntBASIC5.98□□□□□ -1.45
TRIM47Q96LD4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms