Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL133153.1-201ENST00000557756 303 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 SNORA59B-202ENST00000578183 701 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 BNIP3P33-201ENST00000598912 569 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AC128687.2-201ENST00000609657 566 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AC103710.2-201ENST00000609912 942 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AC017083.3-201ENST00000609955 700 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.96□□□□□ -1.78
VPS50Q96JG6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS50Q96JG6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS50Q96JG6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS50Q96JG6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS50Q96JG6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 RNY4P14-201ENST00000363656 96 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 RNU6-483P-201ENST00000384088 108 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 U1.1-201ENST00000384101 164 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 RNU6-39P-201ENST00000384344 107 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 RNU6-328P-201ENST00000390887 106 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 PPIAP31-201ENST00000405422 495 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 MIR1277-201ENST00000408536 78 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 RNA5SP317-201ENST00000410176 116 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 RNA5SP311-201ENST00000411290 116 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC087650.1-201ENST00000431445 468 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 CYCSP43-201ENST00000438233 310 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 RNA5SP246-201ENST00000458909 119 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 RN7SL93P-201ENST00000463035 293 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 RPS3AP50-201ENST00000487064 803 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 RN7SL604P-201ENST00000492589 296 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC135721.1-201ENST00000497954 479 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 RNA5SP315-201ENST00000516340 116 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 RNA5SP312-201ENST00000517068 116 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 IGKV2-38-201ENST00000517443 247 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AP000857.1-201ENST00000532151 543 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC063950.1-201ENST00000552036 308 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AL512360.1-201ENST00000555346 234 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC068135.2-201ENST00000569293 1028 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 XIAPP1-201ENST00000603162 600 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC025449.1-201ENST00000603896 529 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 Z84480.1-201ENST00000605131 311 ntBASIC3.95□□□□□ -1.78
VPS50Q96JG6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS50Q96JG6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS50Q96JG6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC244517.1-201ENST00000606030 2086 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 Y_RNA.402-201ENST00000383972 102 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 RNU1-13P-201ENST00000384499 162 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 SNORA37-201ENST00000384504 129 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS50Q96JG6 RPL30P2-201ENST00000414021 291 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC009237.5-201ENST00000414271 501 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 SSXP9-201ENST00000417503 292 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC244098.2-201ENST00000422068 99 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 TIMM9P3-201ENST00000428659 274 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC000111.3-201ENST00000433478 193 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 MTCO2P29-201ENST00000465212 189 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 SNRPGP3-201ENST00000469405 227 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 BTF3L4P4-201ENST00000506381 449 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 RNU6-1095P-201ENST00000516148 108 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 Y_RNA.693-201ENST00000516641 110 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC012507.3-201ENST00000603556 477 ntBASIC3.94□□□□□ -1.78
VPS50Q96JG6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms