Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AC063943.2-201ENST00000495697 534 ntBASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 SCARNA6-201ENST00000515982 265 ntBASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 RNA5SP153-201ENST00000516498 76 ntBASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 RNU6-1018P-201ENST00000516577 106 ntBASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 RNU6-365P-201ENST00000517113 106 ntBASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 AC141557.1-201ENST00000540982 400 ntBASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 CYCSP39-201ENST00000565821 309 ntBASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 MIR5095-201ENST00000578844 88 ntBASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 MIR3159-201ENST00000584572 74 ntBASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 U1.25-201ENST00000614085 162 ntBASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A3Q96HJ5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 RNA5SP442-201ENST00000365050 107 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 RNA5SP172-201ENST00000365061 118 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 U1.1-201ENST00000384101 164 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 MIR138-2-201ENST00000384916 84 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 RNA5SP280-201ENST00000411230 115 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 AF228730.3-201ENST00000436691 102 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 AC114781.3-201ENST00000512083 142 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 SNORA18.4-201ENST00000516440 124 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 IGKV3-31-201ENST00000523109 329 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 AC011471.1-201ENST00000585766 187 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 AL136531.3-201ENST00000624378 3658 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 AC005618.1-201ENST00000606901 3148 ntBASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A3Q96HJ5 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 SMG1P6-201ENST00000532337 2930 ntBASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 TTC41P-205ENST00000551270 3963 ntBASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 AC126755.2-208ENST00000327792 462 ntBASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 AC138969.1-213ENST00000331436 462 ntBASIC6.1□□□□□ -1.43
MS4A3Q96HJ5 RNU6-837P-201ENST00000391056 108 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms