Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC008725.1-201ENST00000605123 2263 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHFRQ96EP1 LINC00561-201ENST00000565815 2738 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHFRQ96EP1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHFRQ96EP1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHFRQ96EP1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 RNA5SP391-201ENST00000363456 119 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 SNORA63.7-201ENST00000365579 123 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 RNU6-1297P-201ENST00000384415 104 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 RNY4P36-201ENST00000391116 96 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 RPS20P2-201ENST00000402520 389 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC127391.1-201ENST00000411737 98 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC108032.1-201ENST00000416706 207 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHFRQ96EP1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHFRQ96EP1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 CACYBPP2-201ENST00000453625 678 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 PPP1R2P5-201ENST00000457256 603 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 RNA5SP246-201ENST00000458909 119 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 RPL23AP71-201ENST00000470966 469 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC017015.1-201ENST00000477387 286 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 RPS4XP18-201ENST00000495480 763 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 EIF4EP3-201ENST00000498782 656 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC006499.2-201ENST00000513470 337 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 Vault.1-201ENST00000516474 102 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 RNU6-1003P-201ENST00000517099 105 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 SNORA25.17-201ENST00000517184 124 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 COX6B1P6-201ENST00000522347 255 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 SNRPGP18-201ENST00000553000 214 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC053481.3-201ENST00000577881 843 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHFRQ96EP1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 AL133173.2-201ENST00000614270 90 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC039056.2-201ENST00000622261 511 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 AL359757.2-201ENST00000624309 274 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC055839.1-201ENST00000634467 498 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHFRQ96EP1 AC046144.1-201ENST00000478559 1853 ntBASIC4.34□□□□□ -1.71
CHFRQ96EP1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.34□□□□□ -1.71
CHFRQ96EP1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHFRQ96EP1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.34□□□□□ -1.72
CHFRQ96EP1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.34□□□□□ -1.72
CHFRQ96EP1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
CHFRQ96EP1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHFRQ96EP1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.33□□□□□ -1.72
CHFRQ96EP1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHFRQ96EP1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.33□□□□□ -1.72
CHFRQ96EP1 AC092447.10-201ENST00000620607 1652 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CHFRQ96EP1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CHFRQ96EP1 RNU4-20P-201ENST00000365601 151 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHFRQ96EP1 RNU6-456P-201ENST00000384493 107 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 RNU6-831P-201ENST00000384548 107 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 MIR554-201ENST00000384874 96 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 ENSAP1-201ENST00000392855 326 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHFRQ96EP1 AL136116.1-201ENST00000403591 381 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 MIR548I3-201ENST00000408378 149 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 MIR548I1-201ENST00000408810 149 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 RNU6-847P-201ENST00000411115 108 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 AC092634.6-201ENST00000418558 192 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.33□□□□□ -1.72
CHFRQ96EP1 AC005517.2-201ENST00000424673 553 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.33□□□□□ -1.72
CHFRQ96EP1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.33□□□□□ -1.72
CHFRQ96EP1 AL137792.2-201ENST00000443484 235 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 RPL23AP2-201ENST00000471227 466 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 AC010301.1-201ENST00000473936 355 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 AC087385.1-201ENST00000475062 312 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 AC233702.1-201ENST00000482905 502 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 AC106872.3-201ENST00000495104 446 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 AP002812.1-201ENST00000495378 474 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 RN7SKP234-201ENST00000517173 224 ntBASIC4.33□□□□□ -1.72
CHFRQ96EP1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.33□□□□□ -1.72
CHFRQ96EP1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.33□□□□□ -1.72
CHFRQ96EP1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.33□□□□□ -1.72
CHFRQ96EP1 AC008269.2-201ENST00000561915 1105 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms