Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 EXOC5P1-201ENST00000510543 1969 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 OR1S2-201ENST00000302592 978 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 RNU6-600P-201ENST00000362524 99 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 RNU5E-8P-201ENST00000363502 116 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 SNORA20.2-201ENST00000383922 131 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 U8.11-201ENST00000384699 133 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 U8.12-201ENST00000384701 133 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 RPL7P60-201ENST00000397636 735 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 RNU6-648P-201ENST00000410190 107 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AF274854.1-201ENST00000413236 615 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AL139247.1-201ENST00000422768 325 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 DUTP6-201ENST00000425573 462 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 MTCO1P39-201ENST00000426148 480 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 OR2B8P-201ENST00000432841 938 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC090774.1-201ENST00000435925 246 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 NANOGNBP1-201ENST00000448444 480 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AL162389.1-201ENST00000449233 177 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AL359385.1-201ENST00000456509 365 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 U8.18-201ENST00000459285 133 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC114967.1-201ENST00000504890 259 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 SLC25A15P5-201ENST00000508033 253 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC010493.1-201ENST00000513479 292 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC114797.1-201ENST00000514003 728 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 RNA5SP337-201ENST00000517007 109 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 NARSP2-201ENST00000518524 679 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC011979.2-201ENST00000527568 352 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC245389.1-201ENST00000605141 529 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC004067.1-201ENST00000608733 700 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC026585.1-201ENST00000619582 524 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC095031.1-201ENST00000623685 672 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 OR5AK4P-201ENST00000635912 903 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 AC027514.1-201ENST00000588561 1603 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 Y_RNA.619-201ENST00000410951 90 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AC007283.2-201ENST00000424739 197 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AC024082.2-201ENST00000434771 238 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 MTND1P1-201ENST00000445453 368 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AC006480.1-201ENST00000449887 378 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 RN7SL93P-201ENST00000463035 293 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 SNRPGP16-201ENST00000533275 226 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AC087883.1-201ENST00000551882 391 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AC087499.8-201ENST00000578406 226 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 BNIP3P33-201ENST00000598912 569 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AC012443.1-201ENST00000605605 231 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AC012531.5-201ENST00000611375 151 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 TUG1_2.1-201ENST00000614234 87 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AC013476.2-201ENST00000614456 459 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 AL136313.1-201ENST00000624804 202 ntBASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.54□□□□□ -1.68
CHMP4CQ96CF2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC138915.3-201ENST00000562908 1389 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 Y_RNA.41-201ENST00000362646 102 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 SNORA73.2-201ENST00000364946 201 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms