Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-327P-201ENST00000516270 127 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 RNU6-64P-201ENST00000517119 105 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 IGKV2D-36-201ENST00000518643 226 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 FAM60DP-201ENST00000524174 632 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.96□□□□□ -1.62
BRF1Q92994 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.96□□□□□ -1.62
BRF1Q92994 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.96□□□□□ -1.62
BRF1Q92994 MIR4293-201ENST00000584305 78 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.96□□□□□ -1.62
BRF1Q92994 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.96□□□□□ -1.62
BRF1Q92994 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 AC103710.3-201ENST00000608157 948 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 AC006329.2-201ENST00000611491 394 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 FAM27D1-201ENST00000612308 341 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 AC011155.2-201ENST00000623202 216 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 AC011944.2-201ENST00000624440 683 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 AL136313.1-201ENST00000624804 202 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.96□□□□□ -1.62
BRF1Q92994 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.96□□□□□ -1.62
BRF1Q92994 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.96□□□□□ -1.62
BRF1Q92994 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.96□□□□□ -1.62
BRF1Q92994 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
BRF1Q92994 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.96□□□□□ -1.62
BRF1Q92994 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
BRF1Q92994 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.96□□□□□ -1.62
BRF1Q92994 AC011266.1-201ENST00000624119 3569 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
BRF1Q92994 AC027287.1-201ENST00000553115 1453 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BRF1Q92994 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
BRF1Q92994 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRF1Q92994 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRF1Q92994 RNU6-179P-201ENST00000363350 107 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 RNU1-32P-201ENST00000363937 159 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 RNU6-960P-201ENST00000364056 120 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 SNORD42.2-201ENST00000365570 69 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 Y_RNA.373-201ENST00000365600 103 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BRF1Q92994 RNU2-36P-201ENST00000410361 191 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 RNU6-516P-201ENST00000411381 104 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF1Q92994 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF1Q92994 RPL23AP89-201ENST00000439324 255 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF1Q92994 RPL7L1P1-201ENST00000448259 785 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF1Q92994 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF1Q92994 SNORD97-201ENST00000459187 142 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.95□□□□□ -1.62
BRF1Q92994 RPS23P1-201ENST00000491662 432 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF1Q92994 AC135721.1-201ENST00000497954 479 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF1Q92994 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF1Q92994 RNU6-864P-201ENST00000516256 108 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 TRMT10BP1-201ENST00000519377 943 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF1Q92994 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF1Q92994 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF1Q92994 AC024619.4-201ENST00000580924 316 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.95□□□□□ -1.62
BRF1Q92994 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF1Q92994 POLR3GP2-201ENST00000588366 668 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.95□□□□□ -1.62
BRF1Q92994 AC090971.5-201ENST00000621102 293 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF1Q92994 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.95□□□□□ -1.62
BRF1Q92994 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.95□□□□□ -1.62
BRF1Q92994 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRF1Q92994 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRF1Q92994 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF1Q92994 MTND5P3-201ENST00000438536 1800 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 AC121333.1-201ENST00000567488 2709 ntBASIC4.95□□□□□ -1.62
BRF1Q92994 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRF1Q92994 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRF1Q92994 LARP1BP1-201ENST00000506036 1359 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 AC116667.1-201ENST00000604855 2072 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 Y_RNA.128-201ENST00000363391 112 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 Y_RNA.259-201ENST00000364619 101 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 AC019155.1-201ENST00000382242 574 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 Y_RNA.414-201ENST00000384011 101 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 RNU6-1013P-201ENST00000384180 107 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 MT-TC-201ENST00000387405 66 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 MIR1250-201ENST00000408098 113 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 RNA5SP107-201ENST00000411358 122 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 MTCO2P27-201ENST00000420740 428 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 AC018630.2-202ENST00000422992 927 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 RPL7L1P10-201ENST00000427790 463 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.94□□□□□ -1.62
BRF1Q92994 RPL21P133-201ENST00000443666 476 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 PPIAP3-201ENST00000450588 505 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 HMGB3P21-201ENST00000452483 547 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 SNRPFP3-201ENST00000457792 225 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 Y_RNA.639-201ENST00000458981 102 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 RNU7-66P-201ENST00000459469 62 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 RN7SL303P-201ENST00000469773 251 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 AF213884.1-201ENST00000488102 463 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.94□□□□□ -1.62
BRF1Q92994 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms