Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 PCNAP1-202ENST00000595299 752 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 HMGB1P51-201ENST00000605166 638 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.58□□□□□ -2
TOPBP1Q92547 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.58□□□□□ -2
TOPBP1Q92547 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TOPBP1Q92547 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
TOPBP1Q92547 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.58□□□□□ -2
TOPBP1Q92547 MTND5P3-201ENST00000438536 1800 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.58□□□□□ -2
TOPBP1Q92547 RNA5SP189-201ENST00000364920 115 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 Y_RNA.354-201ENST00000365448 111 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 WARS2P1-201ENST00000429678 537 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 MED6P1-201ENST00000439659 713 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.58□□□□□ -2
TOPBP1Q92547 AC146507.1-201ENST00000468335 354 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.58□□□□□ -2
TOPBP1Q92547 RPS26P21-201ENST00000475397 348 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 AC090255.1-201ENST00000495779 349 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 RNU6-1004P-201ENST00000516584 111 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.58□□□□□ -2
TOPBP1Q92547 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.58□□□□□ -2
TOPBP1Q92547 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.58□□□□□ -2
TOPBP1Q92547 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.58□□□□□ -2
TOPBP1Q92547 AC113194.1-201ENST00000606037 500 ntBASIC2.58□□□□□ -2
TOPBP1Q92547 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.58□□□□□ -2
TOPBP1Q92547 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
TOPBP1Q92547 AC002546.1-201ENST00000588041 2504 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
TOPBP1Q92547 RNU1-93P-201ENST00000364704 169 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 Y_RNA.295-201ENST00000364918 102 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 HNRNPDP2-201ENST00000406475 478 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TOPBP1Q92547 RPS4XP11-201ENST00000446897 772 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.57□□□□□ -2
TOPBP1Q92547 AL109741.2-201ENST00000455561 343 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.57□□□□□ -2
TOPBP1Q92547 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.57□□□□□ -2
TOPBP1Q92547 AC008526.1-201ENST00000509149 338 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 AC110792.2-201ENST00000510278 224 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 MTCO3P44-201ENST00000510977 541 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 AL163153.1-201ENST00000554223 283 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 AC136443.5-201ENST00000603741 370 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 DUXAP9-208ENST00000622815 614 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 AC006065.5-201ENST00000623427 349 ntBASIC2.57□□□□□ -2
TOPBP1Q92547 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
TOPBP1Q92547 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
TOPBP1Q92547 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.56□□□□□ -2
TOPBP1Q92547 AP000567.1-201ENST00000406413 156 ntBASIC2.56□□□□□ -2
TOPBP1Q92547 RPL31P2-201ENST00000413849 377 ntBASIC2.56□□□□□ -2
TOPBP1Q92547 AL392003.1-201ENST00000434394 243 ntBASIC2.56□□□□□ -2
TOPBP1Q92547 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.56□□□□□ -2
TOPBP1Q92547 RPL23AP33-201ENST00000442301 452 ntBASIC2.56□□□□□ -2
TOPBP1Q92547 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.56□□□□□ -2
TOPBP1Q92547 RPL21P134-201ENST00000453468 483 ntBASIC2.56□□□□□ -2
TOPBP1Q92547 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.56□□□□□ -2
TOPBP1Q92547 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.56□□□□□ -2
TOPBP1Q92547 CENPUP2-201ENST00000555897 1186 ntBASIC2.56□□□□□ -2
TOPBP1Q92547 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.56□□□□□ -2
TOPBP1Q92547 OR4G1P-201ENST00000588632 938 ntBASIC2.56□□□□□ -2
TOPBP1Q92547 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.56□□□□□ -2
TOPBP1Q92547 AL157700.1-201ENST00000561973 1432 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TOPBP1Q92547 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.55□□□□□ -2
TOPBP1Q92547 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
TOPBP1Q92547 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TOPBP1Q92547 MTND2P16-201ENST00000419987 799 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.55□□□□□ -2
TOPBP1Q92547 MTCO1P43-201ENST00000431831 488 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 HMGN2P20-201ENST00000437531 273 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 AC023512.1-201ENST00000444513 499 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 ATP5J2P3-201ENST00000451550 258 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.55□□□□□ -2
TOPBP1Q92547 ARPC3P2-201ENST00000457786 533 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 AC117525.1-201ENST00000515228 503 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 RNU1-92P-201ENST00000517017 135 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.55□□□□□ -2
TOPBP1Q92547 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.55□□□□□ -2
TOPBP1Q92547 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
TOPBP1Q92547 OR4K8P-201ENST00000578842 1048 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 AP001029.3-201ENST00000588063 596 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 RPL23AP78-201ENST00000599928 470 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 AC138473.1-201ENST00000605717 526 ntBASIC2.55□□□□□ -2
TOPBP1Q92547 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.55□□□□□ -2
TOPBP1Q92547 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.54□□□□□ -2
TOPBP1Q92547 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TOPBP1Q92547 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.54□□□□□ -2
TOPBP1Q92547 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.54□□□□□ -2
TOPBP1Q92547 AC023347.2-201ENST00000433994 462 ntBASIC2.54□□□□□ -2
TOPBP1Q92547 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TOPBP1Q92547 AL627224.1-201ENST00000448334 444 ntBASIC2.54□□□□□ -2
TOPBP1Q92547 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.54□□□□□ -2
TOPBP1Q92547 AC034244.1-201ENST00000507687 207 ntBASIC2.54□□□□□ -2
TOPBP1Q92547 RNA5SP220-201ENST00000516298 104 ntBASIC2.54□□□□□ -2
TOPBP1Q92547 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.54□□□□□ -2
TOPBP1Q92547 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.54□□□□□ -2
TOPBP1Q92547 AL133393.1-201ENST00000603277 287 ntBASIC2.54□□□□□ -2
TOPBP1Q92547 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
TOPBP1Q92547 U73479.1-201ENST00000618062 168 ntBASIC2.54□□□□□ -2
TOPBP1Q92547 MIR6734-201ENST00000621166 68 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms