Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC090096.1-201ENST00000489168 390 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC068657.1-201ENST00000520807 306 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC015720.1-201ENST00000565251 277 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC112191.3-201ENST00000604371 277 ntBASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC0.73□□□□□ -2.29
SYNE2Q8WXH0 ZNF355P-201ENST00000427301 3216 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 SNORD21-201ENST00000383953 95 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 MTCO1P43-201ENST00000431831 488 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 HMGN1P10-201ENST00000474557 553 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 MTCYBP17-201ENST00000503579 789 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 FAM106CP-201ENST00000582212 507 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 GAS5-AS1-201ENST00000602767 694 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AC025946.2-201ENST00000603398 234 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AC087359.1-201ENST00000508335 1740 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 Y_RNA.146-201ENST00000363549 102 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AC019070.1-201ENST00000415008 1024 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 SSXP1-201ENST00000453640 473 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AP002345.1-201ENST00000456493 928 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 RMST_6.1-201ENST00000611980 203 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 COX6CP14-201ENST00000469580 174 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AC104027.1-201ENST00000521887 300 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AC087373.1-201ENST00000524920 491 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AC097504.2-201ENST00000608088 454 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AL513185.2-201ENST00000425543 193 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 RNY1P9-201ENST00000532431 109 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 SGO1P2-201ENST00000429458 1589 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 XKRY2-202ENST00000623874 1581 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 XKRY-202ENST00000624960 1581 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 RN7SL75P-201ENST00000461926 281 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 MIR3186-201ENST00000577404 85 ntBASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SYNE2Q8WXH0 MIR330-201ENST00000362196 94 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 U3.11-201ENST00000364476 212 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.514-201ENST00000384528 112 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AL445193.1-201ENST00000441183 141 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 VN1R96P-201ENST00000446052 858 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC008379.1-201ENST00000463655 464 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AL049830.2-201ENST00000480072 201 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC245166.1-201ENST00000521012 253 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC024560.3-201ENST00000608482 349 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC068944.2-201ENST00000610373 403 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AL118496.1-201ENST00000440201 1812 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 RNU6-452P-201ENST00000384406 107 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 RPL26P37-201ENST00000411983 438 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 RPL21P2-201ENST00000440049 481 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AL118520.1-201ENST00000450770 291 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AL109653.1-201ENST00000603091 248 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AL353718.1-201ENST00000451028 517 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AMD1P1-201ENST00000457220 922 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 RN7SL93P-201ENST00000463035 293 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC104564.1-201ENST00000493028 407 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC005156.1-201ENST00000613371 573 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC010678.1-201ENST00000614118 713 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 MTND4P31-201ENST00000425607 1343 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 MIR373-201ENST00000362273 69 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 MIR329-2-201ENST00000385029 84 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 RNA5SP129-201ENST00000410276 118 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 RPL30P2-201ENST00000414021 291 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 USP9YP8-201ENST00000441913 500 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC013444.2-201ENST00000603317 787 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC078899.5-201ENST00000612475 178 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC091925.1-201ENST00000623204 462 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 METTL21EP-201ENST00000298105 713 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AL133393.1-201ENST00000603277 287 ntBASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.71□□□□□ -2.3
SYNE2Q8WXH0 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 HMGB3P8-201ENST00000449709 577 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AC004263.1-201ENST00000479327 332 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms