Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNED1Q8TER0 AL365361.1-201ENST00000566942 3481 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
SNED1Q8TER0 RNU6-859P-201ENST00000362728 107 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 RNU4-21P-201ENST00000362802 126 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 RNU6-707P-201ENST00000364647 95 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 RNY3P14-201ENST00000384309 102 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC007435.1-201ENST00000421086 415 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNED1Q8TER0 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AL596276.1-201ENST00000434465 418 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC079776.3-201ENST00000450665 370 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 ST13P14-201ENST00000474095 734 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC072039.1-201ENST00000477611 581 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC017037.2-201ENST00000513850 890 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC091805.2-201ENST00000603848 235 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC009220.3-201ENST00000604318 586 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AF250324.2-201ENST00000608299 610 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC131235.4-201ENST00000609288 620 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 AL356266.1-201ENST00000623311 483 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 AP003400.5-201ENST00000624827 617 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.53□□□□□ -1.84
SNED1Q8TER0 GABRG2-229ENST00000641017 3628 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNED1Q8TER0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNED1Q8TER0 PWAR6-201ENST00000552334 4618 ntBASIC3.53□□□□□ -1.84
SNED1Q8TER0 AL512646.1-201ENST00000269395 1077 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
SNED1Q8TER0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 RNU1-112P-201ENST00000364401 164 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
SNED1Q8TER0 RNU6-1042P-201ENST00000384204 107 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 EIF5P1-201ENST00000400019 1231 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 RPS15AP40-201ENST00000419621 391 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 TRIM60P18-201ENST00000441518 828 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 ST13P20-201ENST00000447996 1065 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 SNRPGP9-201ENST00000456025 225 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 Y_RNA.638-201ENST00000459374 113 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC078817.1-201ENST00000492623 435 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC138853.1-201ENST00000503549 823 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 RNA5SP309-201ENST00000516670 106 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC109329.2-201ENST00000519658 482 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC005771.1-201ENST00000585581 349 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC091135.1-201ENST00000585943 307 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC090186.1-201ENST00000605991 572 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC126118.1-201ENST00000607744 628 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC007684.1-201ENST00000609671 477 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AL136981.2-201ENST00000617319 734 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 AC006065.5-201ENST00000623427 349 ntBASIC3.53□□□□□ -1.85
SNED1Q8TER0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNED1Q8TER0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNED1Q8TER0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 ZNF826P-207ENST00000622273 1910 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNED1Q8TER0 ENSAP3-201ENST00000312710 333 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 RNU6-500P-201ENST00000362349 107 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 Y_RNA.88-201ENST00000363029 99 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 RNU6-694P-201ENST00000364071 147 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 Y_RNA.248-201ENST00000364501 109 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 BTBD10P2-201ENST00000404779 676 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 FNDC3CP-201ENST00000420795 1155 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 MRPS36P1-201ENST00000421291 307 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.52□□□□□ -1.85
SNED1Q8TER0 AC104651.1-201ENST00000427559 735 ntBASIC3.52□□□□□ -1.85
SNED1Q8TER0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms