Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 IGKV2D-36-201ENST00000518643 226 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 MTCO1P6-201ENST00000481192 1384 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 RPS15AP36-201ENST00000492022 382 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 UBBP3-201ENST00000445497 241 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 AC012150.2-201ENST00000621300 544 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 AC073055.1-201ENST00000456901 1621 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 HMGB1P5-201ENST00000255320 642 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AL356057.2-201ENST00000403318 432 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AC009901.1-201ENST00000506703 541 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 RPL31P52-201ENST00000407532 367 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AL512504.1-201ENST00000415494 778 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AL513185.2-201ENST00000425543 193 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AL365400.1-201ENST00000431854 640 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AC092473.1-201ENST00000441098 221 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AC006390.1-201ENST00000508068 283 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AC008526.1-201ENST00000509149 338 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AC080078.3-201ENST00000605407 463 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AL449363.1-201ENST00000617815 186 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 SNORD114-22-201ENST00000365423 72 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 MTATP6P4-201ENST00000427725 675 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 RPL21P134-201ENST00000453468 483 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 HMGN1P28-201ENST00000521340 364 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 AL354943.1-201ENST00000572103 781 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 APOOP1-201ENST00000604695 592 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 OR4G1P-203ENST00000641984 1631 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 NR1H5P-201ENST00000452683 1377 ntBASIC1.14□□□□□ -2.23
ALMS1Q8TCU4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 SNORD48-201ENST00000364953 64 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 MIR92A2-201ENST00000385299 75 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 AL021397.1-201ENST00000451806 248 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 CALM1P2-201ENST00000452941 448 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 SNRPFP4-201ENST00000456366 242 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 OR5H4P-201ENST00000510851 923 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 AC025755.1-201ENST00000521306 278 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 MIR4421-201ENST00000578133 69 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 AL355497.1-201ENST00000406262 551 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 SNRPEP4-201ENST00000435815 279 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 MTND3P24-201ENST00000506306 329 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 SNORD53B-201ENST00000577887 78 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 HMGN2P30-201ENST00000423237 256 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 AC093084.1-201ENST00000424233 687 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 AL591704.1-201ENST00000432574 275 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 OSBPL9P3-201ENST00000534523 595 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 AL731537.2-201ENST00000561565 951 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 AL161734.1-201ENST00000609720 557 ntBASIC1.13□□□□□ -2.23
ALMS1Q8TCU4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 HSPE1P11-201ENST00000339579 310 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 SNORA7.1-201ENST00000363750 139 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 RNU6-60P-201ENST00000364792 103 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 RPL23AP39-201ENST00000415533 405 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 IFNA20P-201ENST00000436840 528 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 GPM6BP3-201ENST00000442797 145 ntBASIC1.12□□□□□ -2.23
ALMS1Q8TCU4 HSFY3P-201ENST00000444242 1191 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms