| NLGN4Y | Q8NFZ3 | CTNNA3-203 | ENST00000433211 | 10675 nt | APPRIS P1 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | LRRC39-203 | ENST00000370138 | 1466 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL591441.1-201 | ENST00000618108 | 2247 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RABGAP1L-202 | ENST00000325589 | 1880 nt | TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | ORMDL1-201 | ENST00000325795 | 2692 nt | APPRIS P1 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | SLC25A46-206 | ENST00000509432 | 1596 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | XPO4-201 | ENST00000255305 | 9921 nt | APPRIS P2 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | TPRG1-201 | ENST00000345063 | 5479 nt | APPRIS P1 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | UTS2-202 | ENST00000361696 | 559 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNU6-845P-201 | ENST00000362578 | 103 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNU4-20P-201 | ENST00000365601 | 151 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | BPY2-202 | ENST00000382585 | 321 nt | APPRIS P5 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | SNORA24.1-201 | ENST00000384401 | 135 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNU6-837P-201 | ENST00000391056 | 108 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RPS20P14-201 | ENST00000412545 | 360 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | FRMPD3-AS1-201 | ENST00000415252 | 457 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | PDCL2P1-201 | ENST00000419302 | 352 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL162726.4-201 | ENST00000422010 | 673 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | DUTP6-201 | ENST00000425573 | 462 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL138759.1-201 | ENST00000432120 | 645 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC090617.2-201 | ENST00000433167 | 404 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL023693.1-201 | ENST00000434255 | 216 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC004837.2-201 | ENST00000435766 | 731 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL121872.1-202 | ENST00000435867 | 308 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC004866.2-201 | ENST00000438285 | 481 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | MTND1P18-201 | ENST00000448191 | 573 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL162389.1-201 | ENST00000449233 | 177 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC007953.1-201 | ENST00000450500 | 560 nt | TSL 4 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | PPIAP3-201 | ENST00000450588 | 505 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RPS11P1-201 | ENST00000451072 | 473 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL390961.3-201 | ENST00000458171 | 485 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC008481.1-201 | ENST00000463278 | 396 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC010631.1-201 | ENST00000474150 | 156 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | CREM-230 | ENST00000474931 | 626 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL132838.2-201 | ENST00000492041 | 314 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RN7SL691P-201 | ENST00000494487 | 301 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RPS27AP13-201 | ENST00000498403 | 237 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | LINC02014-201 | ENST00000514010 | 713 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC093206.1-201 | ENST00000515364 | 497 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNA5SP49-201 | ENST00000516450 | 115 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC025524.1-201 | ENST00000518489 | 606 nt | TSL 4 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | BTF3P12-201 | ENST00000519620 | 469 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | LYRM2-203 | ENST00000520318 | 677 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AP005435.4-201 | ENST00000529514 | 284 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | EBAG9-207 | ENST00000531677 | 777 nt | TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | GLYCAM1-201 | ENST00000546596 | 285 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL133371.2-201 | ENST00000556624 | 294 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC007342.4-202 | ENST00000565189 | 721 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC034105.4-201 | ENST00000568304 | 277 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | CCDC178-211 | ENST00000581852 | 876 nt | APPRIS ALT2 TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AF038458.1-201 | ENST00000588406 | 262 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC097467.3-204 | ENST00000595229 | 827 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC005261.5-201 | ENST00000596280 | 355 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC008035.1-201 | ENST00000607353 | 448 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC004696.1-201 | ENST00000614345 | 607 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | BPY2B-204 | ENST00000615850 | 321 nt | APPRIS P5 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | BPY2C-204 | ENST00000618574 | 321 nt | APPRIS P5 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL136221.1-201 | ENST00000621449 | 509 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC006355.2-201 | ENST00000629240 | 317 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | SOS1-202 | ENST00000402219 | 8314 nt | APPRIS P2 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | SMC6-203 | ENST00000402989 | 3729 nt | APPRIS P1 TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | DDX10P1-201 | ENST00000448545 | 1933 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | IPO11-202 | ENST00000409296 | 3564 nt | TSL 2 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | COPG2-201 | ENST00000330992 | 3073 nt | TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | C5orf63-205 | ENST00000535381 | 5680 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | ENPP2-202 | ENST00000259486 | 3233 nt | APPRIS P3 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | TRDN-206 | ENST00000628709 | 1661 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | NXPE1-204 | ENST00000536271 | 2289 nt | TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | C2orf16-202 | ENST00000447166 | 16401 nt | APPRIS ALT2 TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RGS21-201 | ENST00000417209 | 1794 nt | APPRIS P1 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | EMSY-215 | ENST00000533248 | 3798 nt | TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC073343.1-201 | ENST00000328239 | 651 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.11-201 | ENST00000362375 | 109 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNU6-552P-201 | ENST00000362869 | 119 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | SNORD74.4-201 | ENST00000364129 | 80 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNA5SP175-201 | ENST00000364275 | 119 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL359837.1-201 | ENST00000381357 | 287 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNU6-903P-201 | ENST00000391270 | 109 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | Y_RNA.615-201 | ENST00000410769 | 117 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNA5SP104-201 | ENST00000410989 | 118 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNU6-1148P-201 | ENST00000410992 | 104 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL353678.1-201 | ENST00000422735 | 741 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | LINC00375-201 | ENST00000433074 | 601 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | ACBD3-AS1-201 | ENST00000440540 | 535 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | LINC01510-201 | ENST00000441991 | 468 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL118520.1-201 | ENST00000450770 | 291 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC123023.1-201 | ENST00000455974 | 555 nt | TSL 4 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC121764.3-201 | ENST00000465946 | 384 nt | TSL 2 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | LINC00971-201 | ENST00000482721 | 535 nt | TSL 2 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | ALDH7A1P3-201 | ENST00000492517 | 345 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AL592156.1-201 | ENST00000508758 | 304 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNU4ATAC8P-201 | ENST00000516196 | 109 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNU6-1092P-201 | ENST00000516955 | 87 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | RNA5SP503-201 | ENST00000517047 | 117 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | HDAC2-AS2-206 | ENST00000517965 | 850 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | LINCR-0001-203 | ENST00000524047 | 545 nt | TSL 4 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC008489.1-201 | ENST00000524271 | 483 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC105031.3-201 | ENST00000524359 | 616 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | SMILR-201 | ENST00000533992 | 553 nt | TSL 4 BASIC | 4.1 | □□□□□ -1.75 | | |
| NLGN4Y | Q8NFZ3 | AC073530.1-201 | ENST00000535917 | 775 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |