Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC096745.1-201ENST00000509945 370 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 RNA5SP200-201ENST00000516360 103 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 MTCYBP20-201ENST00000524239 1129 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 OR5AK1P-201ENST00000524837 922 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 MIR5007-201ENST00000583098 95 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AC243960.4-201ENST00000600532 288 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AC138473.1-201ENST00000605717 526 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AL589743.7-201ENST00000612637 233 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AC104307.1-201ENST00000616142 196 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AC003001.2-201ENST00000616294 831 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 MIR6729-201ENST00000618194 65 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 MIR6730-201ENST00000622213 67 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AL160394.1-201ENST00000624765 724 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 AC009950.2-201ENST00000636548 183 ntBASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.11□□□□□ -2.23
SPTSSBQ8NFR3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AL139039.1-201ENST00000401900 692 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 RN7SKP278-201ENST00000410504 342 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 RNA5SP450-201ENST00000411206 102 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC244636.1-201ENST00000421152 228 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AL050321.1-201ENST00000432363 400 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 UBE2V1P5-201ENST00000440070 405 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AL591503.2-201ENST00000442314 1005 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 RAC1P7-201ENST00000445367 377 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC027575.1-201ENST00000481064 460 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 RPS29P20-201ENST00000489592 171 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 WBP1LP4-201ENST00000505043 344 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC006499.2-201ENST00000513470 337 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 RNU6-27P-201ENST00000516146 107 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 SCARNA3-201ENST00000517097 143 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 HAUS1P3-201ENST00000523909 662 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC084824.1-201ENST00000550917 1005 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC012435.1-202ENST00000568772 240 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 MIR3199-1-201ENST00000582434 88 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 HMGN2P15-201ENST00000585707 270 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 MTCO3P22-201ENST00000603219 784 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 SUMO2P14-201ENST00000604488 293 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC124312.4-201ENST00000605533 310 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC007619.2-201ENST00000605743 379 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC073592.7-201ENST00000623659 507 ntBASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.1□□□□□ -2.23
SPTSSBQ8NFR3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 RNU6-543P-201ENST00000362576 108 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 OR1L1-202ENST00000373686 1083 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 RNU6-748P-201ENST00000384648 107 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 AC016769.3-201ENST00000396562 315 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 HMGN2P39-201ENST00000398005 273 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 RPL7P27-201ENST00000403775 720 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 AL589655.1-201ENST00000405398 482 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 AC023141.4-201ENST00000412031 328 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 EDDM3CP-201ENST00000415977 425 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 AC005326.1-201ENST00000429197 123 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 AC024082.2-201ENST00000434771 238 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 USP9YP15-201ENST00000442391 422 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 AL360221.1-201ENST00000445989 335 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 RPL23AP6-201ENST00000446637 472 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 AP001486.1-201ENST00000463339 476 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 HMGN1P8-201ENST00000463578 288 ntBASIC1.09□□□□□ -2.23
SPTSSBQ8NFR3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms