Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 NANOGP5-201ENST00000424456 877 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 MTCO3P30-201ENST00000426425 670 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AL365496.1-201ENST00000426885 215 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 PGBD4P3-201ENST00000440731 581 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 RNF2P1-201ENST00000442955 1010 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 WASF1P1-201ENST00000447560 1131 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 RPL31P41-201ENST00000477967 372 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 MRPL42P6-201ENST00000486397 371 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 RNA5SP200-201ENST00000516360 103 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AC103833.1-201ENST00000517442 172 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 LRRC37A5P-203ENST00000580181 585 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AC002984.1-201ENST00000591692 448 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AC016542.1-201ENST00000608259 493 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AP004247.3-201ENST00000608682 624 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AP001033.2-201ENST00000609701 1003 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 UCA1.1-201ENST00000620952 75 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 MIR6132-201ENST00000622083 109 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 MTND5P31-201ENST00000419366 1374 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AC025263.3-201ENST00000622965 1396 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AL596028.1-201ENST00000326971 197 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AL136372.1-201ENST00000403060 228 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AL513475.1-201ENST00000406602 315 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AC009237.2-201ENST00000421358 284 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 RPP40P1-201ENST00000426762 456 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AC012497.1-201ENST00000429392 575 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AC114878.1-201ENST00000441166 358 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 BX248409.1-201ENST00000455497 255 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AC113155.1-201ENST00000511141 769 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 OR4K7P-201ENST00000580232 945 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 MIR3935-201ENST00000583472 104 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 uc_338.20-201ENST00000621563 178 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 AC008669.1-201ENST00000565823 2178 ntBASIC2.36□□□□□ -2.03
CCDC112Q8NEF3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 RNU1-91P-201ENST00000364746 163 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 RNU6-921P-201ENST00000384361 107 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC107081.1-201ENST00000414975 361 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC009963.1-201ENST00000417265 157 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC092573.2-201ENST00000434546 243 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AL445687.1-201ENST00000439946 251 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AL591719.1-201ENST00000444669 744 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 snoU13.26-201ENST00000459452 105 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 NAP1L1P3-201ENST00000462291 880 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 EIF4EP3-201ENST00000498782 656 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC114322.1-201ENST00000506771 926 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 RNU1-41P-201ENST00000516161 162 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 RNU1-48P-201ENST00000516400 162 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 GLYCAM1-201ENST00000546596 285 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC233266.2-201ENST00000567067 528 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC009314.1-201ENST00000603871 304 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC073569.3-201ENST00000619055 682 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 MTND5P11-201ENST00000511037 1812 ntBASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC112Q8NEF3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC112Q8NEF3 MIR504-201ENST00000385065 83 ntBASIC2.34□□□□□ -2.03
CCDC112Q8NEF3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
CCDC112Q8NEF3 Z98742.3-201ENST00000418637 326 ntBASIC2.34□□□□□ -2.03
CCDC112Q8NEF3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC112Q8NEF3 AC010095.1-201ENST00000443543 144 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms