Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 SNORA3.3-201ENST00000408712 125 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 FTH1P1-201ENST00000437933 532 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 RPS29P15-201ENST00000458329 171 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC108022.1-201ENST00000493466 478 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC020893.1-201ENST00000502452 580 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC104619.4-201ENST00000510773 249 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC074250.1-201ENST00000511117 192 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 Y_RNA.665-201ENST00000516177 98 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 RPL7P20-201ENST00000520308 745 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC011979.2-201ENST00000527568 352 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC007151.1-201ENST00000572774 483 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC006116.10-201ENST00000591836 581 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 SNRPGP17-201ENST00000603780 214 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC080078.3-201ENST00000605407 463 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC004908.2-201ENST00000609090 574 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC245517.5-201ENST00000611529 162 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AC000374.1-201ENST00000434698 1745 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 Y_RNA.144-201ENST00000363521 113 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 RNU5A-8P-201ENST00000364102 114 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 SNORD82-201ENST00000365530 70 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 RNU6-38P-201ENST00000384085 107 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 RNVU1-14-201ENST00000384770 164 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AL606923.1-201ENST00000406616 190 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 RPL5P18-201ENST00000406671 891 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 RPS29P4-201ENST00000414733 161 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 MTND3P2-201ENST00000438452 342 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AC104308.1-201ENST00000454621 333 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 Y_RNA.639-201ENST00000458981 102 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 RNU6-333P-201ENST00000459117 107 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 RN7SL293P-201ENST00000481765 281 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 FAM206BP-201ENST00000510179 541 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 RN7SKP219-201ENST00000516825 296 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 SULT1C2P2-201ENST00000562517 294 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 POLR3GP2-201ENST00000588366 668 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AC008737.2-201ENST00000599446 118 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AC244505.7-201ENST00000599675 272 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AL451044.1-201ENST00000604867 238 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AL606537.1-201ENST00000607258 2011 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 AC004972.1-201ENST00000623934 2209 ntBASIC5.07□□□□□ -1.6
LINC00116Q8NCU8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 RNU6-1243P-201ENST00000364028 107 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 SNORA62.1-201ENST00000364287 154 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 MIR558-201ENST00000384920 94 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 AL035423.1-201ENST00000420331 213 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 MTATP6P16-201ENST00000434543 526 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 AC243772.1-201ENST00000451620 410 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 snoU13.7-201ENST00000459220 104 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 AL133162.1-201ENST00000463228 453 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 RPS4XP10-201ENST00000465034 731 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms