Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.56□□□□□ -2
CDKL3Q8IVW4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.56□□□□□ -2
CDKL3Q8IVW4 RPL27AP8-201ENST00000424277 446 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC019097.1-201ENST00000424783 735 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC063976.3-201ENST00000426849 329 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC025750.2-201ENST00000442609 450 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC092798.1-201ENST00000458542 409 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC133134.1-201ENST00000466800 359 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC013828.1-201ENST00000481845 158 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC069306.1-201ENST00000507006 843 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.56□□□□□ -2
CDKL3Q8IVW4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDKL3Q8IVW4 RNA5SP471-201ENST00000516971 106 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC090502.2-201ENST00000549267 280 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.56□□□□□ -2
CDKL3Q8IVW4 MIR3609-201ENST00000582661 80 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC079089.3-201ENST00000603094 673 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.56□□□□□ -2
CDKL3Q8IVW4 AL161629.2-201ENST00000615347 275 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AL138955.1-201ENST00000622881 1040 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 AC109454.4-201ENST00000623411 649 ntBASIC2.56□□□□□ -2
CDKL3Q8IVW4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.56□□□□□ -2
CDKL3Q8IVW4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 ANKRD36P1-201ENST00000344424 659 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 SUGT1P1-201ENST00000379514 476 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 MIR27B-201ENST00000385129 97 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 AL079342.2-201ENST00000403367 482 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 RNU2-28P-201ENST00000410457 189 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 USP9YP21-201ENST00000420603 432 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 DPRXP1-201ENST00000426312 460 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 AC098826.1-201ENST00000433943 471 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 RNF2P1-201ENST00000442955 1010 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 MTCYBP42-201ENST00000444653 1130 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 SUMO2P5-201ENST00000506790 245 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 RPL23AP94-201ENST00000512518 302 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 AC025881.1-201ENST00000518851 512 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDKL3Q8IVW4 OR4R1P-201ENST00000529879 463 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 MIR5708-201ENST00000579723 85 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 MIR4298-201ENST00000584380 73 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 AC091946.2-201ENST00000606105 291 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 OR2AS2P-201ENST00000606902 342 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 RNU6-1192P-201ENST00000612197 107 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 RNU6-489P-201ENST00000618289 107 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDKL3Q8IVW4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDKL3Q8IVW4 AL157770.1-201ENST00000623049 439 ntBASIC2.55□□□□□ -2
CDKL3Q8IVW4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
CDKL3Q8IVW4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
CDKL3Q8IVW4 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.54□□□□□ -2
CDKL3Q8IVW4 RNU2-15P-201ENST00000410692 191 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 MTCO1P3-201ENST00000429327 192 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 SEPT7P5-201ENST00000434048 306 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 NDUFB4P6-201ENST00000436819 366 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 AC093155.1-201ENST00000440164 826 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.54□□□□□ -2
CDKL3Q8IVW4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.54□□□□□ -2
CDKL3Q8IVW4 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 Z82190.1-201ENST00000454534 490 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 RPL23AP45-201ENST00000476406 468 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.54□□□□□ -2
CDKL3Q8IVW4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDKL3Q8IVW4 VN1R104P-201ENST00000505115 1009 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.54□□□□□ -2
CDKL3Q8IVW4 RN7SKP24-201ENST00000515888 284 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 RNU6-1028P-201ENST00000517164 93 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 AC027309.2-201ENST00000520566 192 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 DEFB130C-202ENST00000530001 230 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDKL3Q8IVW4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.54□□□□□ -2
CDKL3Q8IVW4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.54□□□□□ -2
CDKL3Q8IVW4 RPL23AP84-201ENST00000571193 464 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 AC090616.3-201ENST00000582184 217 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
CDKL3Q8IVW4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.54□□□□□ -2
CDKL3Q8IVW4 RPL23AP92-201ENST00000603609 255 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 DUXAP3-201ENST00000603616 594 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 AP002826.1-201ENST00000608835 315 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 AC093673.2-201ENST00000609674 331 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 U4.3-201ENST00000621047 82 ntBASIC2.54□□□□□ -2
CDKL3Q8IVW4 AL356585.4-201ENST00000623078 1229 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms