Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 MTCYBP12-201ENST00000440559 1134 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 COX6CP14-201ENST00000469580 174 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC005912.1-201ENST00000495392 255 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC084851.1-201ENST00000529105 249 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 RPL23AP78-201ENST00000599928 470 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 MIR502-201ENST00000606349 86 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC073055.1-201ENST00000456901 1621 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 NUP58P1-201ENST00000502546 1738 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 ELOCP6-201ENST00000429066 328 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 THAP5P1-201ENST00000439089 262 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 ELOCP12-201ENST00000458706 328 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC008885.2-201ENST00000509506 930 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC010200.2-201ENST00000605098 235 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC145207.9-201ENST00000623802 325 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC008568.2-201ENST00000623862 2313 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 SNORA51.2-201ENST00000364595 132 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 XKRYP6-201ENST00000440468 1116 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 XKRYP3-201ENST00000442113 1116 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 MTND1P18-201ENST00000448191 573 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AP001180.3-201ENST00000582221 145 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CSMD3Q7Z407 DDX43P2-201ENST00000604753 1354 ntBASIC1.06□□□□□ -2.24
CSMD3Q7Z407 AC092638.1-201ENST00000411966 1275 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AL096701.2-201ENST00000416920 238 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 UBE2V1P6-201ENST00000430840 422 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC092754.2-201ENST00000463506 460 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 RPL21P104-201ENST00000464143 478 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC023825.1-201ENST00000566704 1030 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC090425.2-201ENST00000608818 501 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 VN1R74P-201ENST00000613259 503 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC006065.5-201ENST00000623427 349 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 MTCO1P6-201ENST00000481192 1384 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 OR4G11P-202ENST00000642116 1414 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC006026.1-201ENST00000444025 1803 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 RPL23AP29-201ENST00000397284 453 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 RPL30P3-201ENST00000424262 333 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 WARS2P1-201ENST00000429678 537 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 RPL34P26-201ENST00000445636 354 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 TRBV8-1-201ENST00000481590 279 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC034222.1-201ENST00000494052 532 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 Y_RNA.681-201ENST00000516445 113 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC011712.1-201ENST00000588959 234 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC005156.1-201ENST00000613371 573 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 MIR320A-201ENST00000385302 82 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 SSR1P1-201ENST00000407630 814 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 UBE2V2P1-201ENST00000434717 398 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 HMGB1P26-201ENST00000452520 628 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 AC019131.2-201ENST00000609071 870 ntBASIC1.05□□□□□ -2.24
CSMD3Q7Z407 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CSMD3Q7Z407 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CSMD3Q7Z407 MIR373-201ENST00000362273 69 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 RNU6-37P-201ENST00000362692 107 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 RNU6-11P-201ENST00000364234 107 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 DEFB109C-201ENST00000382575 264 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 DEFB109B-201ENST00000382656 264 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AC073901.1-201ENST00000462471 408 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.04□□□□□ -2.24
CSMD3Q7Z407 7SK.7-201ENST00000603504 247 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AC034236.3-201ENST00000605999 461 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 RNA5SP457-201ENST00000363657 124 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 USP9YP27-201ENST00000418455 438 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 FNDC3CP-201ENST00000420795 1155 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 AL031659.1-201ENST00000447075 539 ntBASIC1.04□□□□□ -2.24
CSMD3Q7Z407 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.04□□□□□ -2.24
CSMD3Q7Z407 RNU6-1218P-201ENST00000458990 108 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms