Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 RPL9P7-201ENST00000330965 580 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 SNORA63.3-201ENST00000362682 132 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 SNRPEP2-201ENST00000397592 279 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 HMGN2P35-201ENST00000412164 270 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 MTATP6P27-201ENST00000416987 621 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC013262.1-201ENST00000426710 252 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 AL512844.2-201ENST00000433990 593 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC105272.1-201ENST00000438604 198 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC093156.1-201ENST00000440382 670 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 MTND2P20-201ENST00000440805 661 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 RPS24P13-201ENST00000442520 397 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC005297.2-201ENST00000450430 606 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 RNU7-23P-201ENST00000459465 62 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 OR4G11P-201ENST00000492842 939 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC023424.2-201ENST00000493479 777 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 EIF4EP3-201ENST00000498782 656 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SCXQ7RTU7 RNA5SP367-201ENST00000516557 118 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 RNU6-826P-201ENST00000516827 104 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 DEFB130C-202ENST00000530001 230 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 OR4R2P-201ENST00000530815 597 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SCXQ7RTU7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 MTCO3P13-201ENST00000577757 781 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SCXQ7RTU7 MIR4672-201ENST00000583126 81 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 AL445435.1-201ENST00000604232 665 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC069304.2-201ENST00000605154 435 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 OR2AS2P-201ENST00000606902 342 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SCXQ7RTU7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 CRYM-AS1-204ENST00000637983 556 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SCXQ7RTU7 AC107982.1-201ENST00000507171 1300 ntBASIC1.88□□□□□ -2.11
SCXQ7RTU7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SCXQ7RTU7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 SNORA68.1-201ENST00000364537 132 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 SNORA9.2-201ENST00000365361 133 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 RNU6-76P-201ENST00000384060 104 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 AL603865.2-201ENST00000401679 213 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 HMGB1P17-201ENST00000403495 628 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SCXQ7RTU7 CCDC58P2-201ENST00000417131 366 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 B3GALNT1P1-201ENST00000420569 975 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 USP9YP21-201ENST00000420603 432 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 AC099548.1-201ENST00000421443 426 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 AL356867.1-201ENST00000429623 299 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 GTF2IP20-201ENST00000431663 360 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 OR4K11P-201ENST00000431829 904 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 USP9YP22-201ENST00000438971 294 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 AL445687.1-201ENST00000439946 251 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 FGF7P5-201ENST00000441829 291 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 DPPA3P1-201ENST00000448050 469 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 RPS15AP27-201ENST00000449183 343 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 MTCO3P11-201ENST00000455103 774 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 RN7SL633P-201ENST00000488974 297 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SCXQ7RTU7 MTCYBP17-201ENST00000503579 789 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 AC114981.1-201ENST00000503897 678 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SCXQ7RTU7 MTCYBP16-201ENST00000509187 1129 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 RNU6-1282P-201ENST00000516735 96 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 HIGD1AP17-201ENST00000554576 276 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.87□□□□□ -2.11
SCXQ7RTU7 MIR5708-201ENST00000579723 85 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 MIR3117-201ENST00000584034 78 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 MIR4658-201ENST00000584344 65 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 ELOCP29-201ENST00000588193 334 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 AL022067.1-201ENST00000602426 454 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 NRBF2P5-201ENST00000603087 788 ntBASIC1.87□□□□□ -2.11
SCXQ7RTU7 AP000787.2-201ENST00000604432 568 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms