Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.52□□□□□ -1.85
USP43Q70EL4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.52□□□□□ -1.85
USP43Q70EL4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.52□□□□□ -1.85
USP43Q70EL4 AC107954.1-201ENST00000565906 727 ntBASIC3.52□□□□□ -1.85
USP43Q70EL4 AC022655.2-201ENST00000577280 318 ntBASIC3.52□□□□□ -1.85
USP43Q70EL4 AC015917.1-201ENST00000579654 510 ntBASIC3.52□□□□□ -1.85
USP43Q70EL4 MIR3158-1-201ENST00000583596 81 ntBASIC3.52□□□□□ -1.85
USP43Q70EL4 BNIP3P8-201ENST00000597863 560 ntBASIC3.52□□□□□ -1.85
USP43Q70EL4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.52□□□□□ -1.85
USP43Q70EL4 AC103710.1-201ENST00000610003 901 ntBASIC3.52□□□□□ -1.85
USP43Q70EL4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.52□□□□□ -1.85
USP43Q70EL4 AC006133.1-201ENST00000617106 264 ntBASIC3.52□□□□□ -1.85
USP43Q70EL4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
USP43Q70EL4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP43Q70EL4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
USP43Q70EL4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USP43Q70EL4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
USP43Q70EL4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP43Q70EL4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP43Q70EL4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP43Q70EL4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP43Q70EL4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USP43Q70EL4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP43Q70EL4 OR4G11P-202ENST00000642116 1414 ntBASIC3.52□□□□□ -1.85
USP43Q70EL4 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.52□□□□□ -1.85
USP43Q70EL4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 MFSD8-236ENST00000641509 4050 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.51□□□□□ -1.85
USP43Q70EL4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
USP43Q70EL4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.51□□□□□ -1.85
USP43Q70EL4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP43Q70EL4 RNU6-251P-201ENST00000363235 104 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 RNU6-115P-201ENST00000364310 107 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 SNORD81.2-201ENST00000365153 76 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 RNU6-483P-201ENST00000384088 108 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 SNORA57.3-201ENST00000411095 141 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 RPS3AP3-201ENST00000411933 242 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.51□□□□□ -1.85
USP43Q70EL4 RPL7AP73-201ENST00000413490 353 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.51□□□□□ -1.85
USP43Q70EL4 HMGB3P20-201ENST00000417997 600 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP43Q70EL4 SAR1AP4-201ENST00000429225 591 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AL117339.2-201ENST00000430475 180 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AL451074.3-201ENST00000437709 472 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 MTND3P2-201ENST00000438452 342 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 RPL21P89-201ENST00000444021 467 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 RPS17P13-201ENST00000448974 407 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.51□□□□□ -1.85
USP43Q70EL4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AF213884.1-201ENST00000488102 463 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 TRBV12-2-201ENST00000489763 344 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP43Q70EL4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AC006499.2-201ENST00000513470 337 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 SNORA67.7-201ENST00000516664 135 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 SUMO2P20-201ENST00000520803 283 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AC008562.1-201ENST00000521763 330 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 TVP23BP1-201ENST00000557500 617 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AC090877.1-201ENST00000561418 344 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.51□□□□□ -1.85
USP43Q70EL4 MIR4738-201ENST00000579134 87 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 MIR4444-1-201ENST00000581696 74 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.51□□□□□ -1.85
USP43Q70EL4 MIR4444-2-201ENST00000584390 74 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.51□□□□□ -1.85
USP43Q70EL4 AC091488.1-201ENST00000604239 660 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AC112191.3-201ENST00000604371 277 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AC011373.1-201ENST00000607270 237 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AC093788.1-201ENST00000609356 927 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 AL590282.1-201ENST00000610379 1136 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 MIR6075-201ENST00000620782 95 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.51□□□□□ -1.85
USP43Q70EL4 CR392039.4-201ENST00000624968 501 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 PWAR6-201ENST00000552334 4618 ntBASIC3.51□□□□□ -1.85
USP43Q70EL4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP43Q70EL4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
USP43Q70EL4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.51□□□□□ -1.85
USP43Q70EL4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP43Q70EL4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP43Q70EL4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP43Q70EL4 MTCO1P9-201ENST00000505577 1534 ntBASIC3.5□□□□□ -1.85
USP43Q70EL4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
USP43Q70EL4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP43Q70EL4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms