Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU6-984P-201ENST00000363236 109 ntBASIC1.09□□□□□ -2.23
VPS13CQ709C8 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
VPS13CQ709C8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.09□□□□□ -2.23
VPS13CQ709C8 RPS6P15-201ENST00000431996 751 ntBASIC1.09□□□□□ -2.23
VPS13CQ709C8 AP003033.1-201ENST00000527244 415 ntBASIC1.09□□□□□ -2.23
VPS13CQ709C8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS13CQ709C8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.09□□□□□ -2.23
VPS13CQ709C8 AC091488.1-201ENST00000604239 660 ntBASIC1.09□□□□□ -2.23
VPS13CQ709C8 AC111188.2-201ENST00000529697 1387 ntBASIC1.09□□□□□ -2.23
VPS13CQ709C8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
VPS13CQ709C8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.09□□□□□ -2.24
VPS13CQ709C8 SNRPGP13-201ENST00000442212 177 ntBASIC1.09□□□□□ -2.24
VPS13CQ709C8 AL157827.1-201ENST00000447622 132 ntBASIC1.09□□□□□ -2.24
VPS13CQ709C8 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.09□□□□□ -2.24
VPS13CQ709C8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.09□□□□□ -2.24
VPS13CQ709C8 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VPS13CQ709C8 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 Y_RNA.294-201ENST00000364916 102 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 HMGN1P14-201ENST00000412459 517 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 RPS12P24-201ENST00000412619 387 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 AC098934.3-201ENST00000430450 190 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 MAGOH2P-202ENST00000584384 429 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 AP000676.4-201ENST00000624659 623 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 HSPE1P11-201ENST00000339579 310 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 MIR1304-201ENST00000408243 91 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 LRRC34P2-201ENST00000514850 553 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 HMGN2P38-201ENST00000423806 265 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 AC108059.3-201ENST00000456388 214 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 RPS15AP1-201ENST00000457423 391 ntBASIC1.08□□□□□ -2.24
VPS13CQ709C8 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VPS13CQ709C8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
VPS13CQ709C8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
VPS13CQ709C8 BMI1P1-201ENST00000445879 941 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.07□□□□□ -2.24
VPS13CQ709C8 HSPE1P3-201ENST00000559254 309 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 PABPC1P9-201ENST00000426076 1612 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 U8.9-201ENST00000365667 134 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 Y_RNA.471-201ENST00000384312 102 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 MIR216A-201ENST00000385063 110 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.07□□□□□ -2.24
VPS13CQ709C8 AC008427.1-201ENST00000503102 655 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 DNAJC8P1-201ENST00000554535 372 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.07□□□□□ -2.24
VPS13CQ709C8 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
VPS13CQ709C8 SNORA50A-202ENST00000629536 136 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 FO624990.1-201ENST00000636373 85 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
VPS13CQ709C8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.07□□□□□ -2.24
VPS13CQ709C8 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
VPS13CQ709C8 RNA5SP363-201ENST00000365072 115 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 MIR758-201ENST00000390227 88 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 AC007560.1-201ENST00000426912 237 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 VN1R108P-201ENST00000431580 830 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 AL445305.1-201ENST00000432577 575 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS13CQ709C8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS13CQ709C8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.07□□□□□ -2.24
VPS13CQ709C8 AC097504.2-201ENST00000608088 454 ntBASIC1.07□□□□□ -2.24
VPS13CQ709C8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS13CQ709C8 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
VPS13CQ709C8 AL590233.1-201ENST00000430017 456 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 RPS6P12-201ENST00000432491 726 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.06□□□□□ -2.24
VPS13CQ709C8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.06□□□□□ -2.24
VPS13CQ709C8 HMGB1P5-201ENST00000255320 642 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 Y_RNA.303-201ENST00000364998 94 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 AL358176.2-201ENST00000425769 204 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.06□□□□□ -2.24
VPS13CQ709C8 AP000873.1-201ENST00000463987 400 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS13CQ709C8 RNA5SP384-201ENST00000516615 116 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 OOSP1P2-201ENST00000579644 351 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.06□□□□□ -2.24
VPS13CQ709C8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
VPS13CQ709C8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
VPS13CQ709C8 RNU1-133P-201ENST00000364867 167 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 RNU1-78P-201ENST00000391248 165 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 ARF4P2-201ENST00000430209 526 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 VN1R96P-201ENST00000446052 858 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 MIR3935-201ENST00000583472 104 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 AL590099.1-201ENST00000615276 138 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 AC074140.1-201ENST00000621617 208 ntBASIC1.06□□□□□ -2.24
VPS13CQ709C8 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS13CQ709C8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS13CQ709C8 AL357078.2-201ENST00000416486 427 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 RPL30P3-201ENST00000424262 333 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 RPS23P4-201ENST00000487908 423 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 NDUFB4P9-201ENST00000511646 388 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms