Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 FER-210ENST00000628534 558 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC106871.1-201ENST00000568324 3102 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AL138713.1-201ENST00000624026 2130 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC008725.1-201ENST00000605123 2263 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 RNU6-1120P-201ENST00000362988 108 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 Y_RNA.160-201ENST00000363677 92 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 RNY3P13-201ENST00000365542 102 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 RNU6-761P-201ENST00000384148 107 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 Y_RNA.493-201ENST00000384422 102 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 MIR1-2-201ENST00000384961 85 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 ZNF90P2-204ENST00000419323 1075 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 GPR143P-201ENST00000434155 205 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 USP9YP8-201ENST00000441913 500 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 HMGN2P21-201ENST00000447764 270 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 TPT1P14-201ENST00000448018 505 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 HMGB1P25-201ENST00000468402 607 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC091951.2-201ENST00000500762 203 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC005921.1-201ENST00000510589 286 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 RNU6-835P-201ENST00000516974 104 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC090281.1-201ENST00000523019 276 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AF235103.2-201ENST00000525753 346 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 HIF1AP1-201ENST00000553642 175 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 OR4T1P-201ENST00000554933 911 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 BNIP3P22-201ENST00000593399 556 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC015813.4-201ENST00000610469 179 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 Y_RNA.804-201ENST00000615262 101 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC063943.3-201ENST00000615562 356 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AL713922.2-201ENST00000619384 716 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 YWHAEP7-203ENST00000622054 312 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC039056.2-201ENST00000622261 511 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC009033.1-201ENST00000624279 431 ntBASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf139Q6ZV77 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 ZNF680P1-201ENST00000436625 1469 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 OR1S2-201ENST00000302592 978 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC007685.1-201ENST00000329806 452 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RNU6-451P-201ENST00000362921 107 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RNU6-1097P-201ENST00000363586 107 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RNY3P3-201ENST00000363816 102 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RNU5A-8P-201ENST00000364102 114 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RNY1P12-201ENST00000364251 105 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RHOT1P2-201ENST00000366423 333 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 MT-TC-201ENST00000387405 66 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AL356776.1-201ENST00000406574 447 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RNU2-9P-201ENST00000410194 145 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RNU2-47P-201ENST00000410649 186 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 MRPL50P2-201ENST00000416821 482 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 MTND3P23-201ENST00000431980 347 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC022364.2-201ENST00000457963 554 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RN7SL585P-201ENST00000470538 280 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms