Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.79□□□□□ -2.12
UBR3Q6ZT12 AC135721.1-201ENST00000497954 479 ntBASIC1.79□□□□□ -2.12
UBR3Q6ZT12 MTCYBP18-201ENST00000501056 747 ntBASIC1.79□□□□□ -2.12
UBR3Q6ZT12 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.79□□□□□ -2.12
UBR3Q6ZT12 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.79□□□□□ -2.12
UBR3Q6ZT12 DNAJC8P1-201ENST00000554535 372 ntBASIC1.79□□□□□ -2.12
UBR3Q6ZT12 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.79□□□□□ -2.12
UBR3Q6ZT12 APOOP1-201ENST00000604695 592 ntBASIC1.79□□□□□ -2.12
UBR3Q6ZT12 AL133216.2-202ENST00000634512 349 ntBASIC1.79□□□□□ -2.12
UBR3Q6ZT12 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
UBR3Q6ZT12 MIR1304-201ENST00000408243 91 ntBASIC1.78□□□□□ -2.12
UBR3Q6ZT12 AC092447.6-201ENST00000414578 210 ntBASIC1.78□□□□□ -2.12
UBR3Q6ZT12 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.78□□□□□ -2.12
UBR3Q6ZT12 LSM1P1-201ENST00000438629 273 ntBASIC1.78□□□□□ -2.12
UBR3Q6ZT12 HMGN2P18-201ENST00000450680 270 ntBASIC1.78□□□□□ -2.12
UBR3Q6ZT12 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.78□□□□□ -2.12
UBR3Q6ZT12 RNA5SP220-201ENST00000516298 104 ntBASIC1.78□□□□□ -2.12
UBR3Q6ZT12 RNU6-347P-201ENST00000516658 105 ntBASIC1.78□□□□□ -2.12
UBR3Q6ZT12 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.78□□□□□ -2.12
UBR3Q6ZT12 PSMA3P-201ENST00000555485 635 ntBASIC1.78□□□□□ -2.12
UBR3Q6ZT12 PVT1_3.1-201ENST00000620853 95 ntBASIC1.78□□□□□ -2.12
UBR3Q6ZT12 MTND5P3-201ENST00000438536 1800 ntBASIC1.78□□□□□ -2.12
UBR3Q6ZT12 SNORD59.2-201ENST00000516873 68 ntBASIC1.77□□□□□ -2.13
UBR3Q6ZT12 AC139103.1-201ENST00000534696 1030 ntBASIC1.77□□□□□ -2.13
UBR3Q6ZT12 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.77□□□□□ -2.13
UBR3Q6ZT12 AL121839.1-201ENST00000556233 1185 ntBASIC1.77□□□□□ -2.13
UBR3Q6ZT12 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UBR3Q6ZT12 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.77□□□□□ -2.13
UBR3Q6ZT12 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.77□□□□□ -2.13
UBR3Q6ZT12 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR3Q6ZT12 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
UBR3Q6ZT12 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.77□□□□□ -2.13
UBR3Q6ZT12 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UBR3Q6ZT12 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.77□□□□□ -2.13
UBR3Q6ZT12 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.77□□□□□ -2.13
UBR3Q6ZT12 SSXP4-201ENST00000451349 245 ntBASIC1.77□□□□□ -2.13
UBR3Q6ZT12 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.77□□□□□ -2.13
UBR3Q6ZT12 AC092991.1-201ENST00000477176 376 ntBASIC1.77□□□□□ -2.13
UBR3Q6ZT12 MTATP6P3-201ENST00000581686 676 ntBASIC1.77□□□□□ -2.13
UBR3Q6ZT12 SNHG22-203ENST00000617833 660 ntBASIC1.77□□□□□ -2.13
UBR3Q6ZT12 HMGN2P19-201ENST00000425149 265 ntBASIC1.76□□□□□ -2.13
UBR3Q6ZT12 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.76□□□□□ -2.13
UBR3Q6ZT12 HMGN2P13-201ENST00000476476 274 ntBASIC1.76□□□□□ -2.13
UBR3Q6ZT12 AC034222.1-201ENST00000494052 532 ntBASIC1.76□□□□□ -2.13
UBR3Q6ZT12 AC023050.1-201ENST00000498198 304 ntBASIC1.76□□□□□ -2.13
UBR3Q6ZT12 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.76□□□□□ -2.13
UBR3Q6ZT12 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.76□□□□□ -2.13
UBR3Q6ZT12 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.76□□□□□ -2.13
UBR3Q6ZT12 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.76□□□□□ -2.13
UBR3Q6ZT12 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR3Q6ZT12 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
UBR3Q6ZT12 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.76□□□□□ -2.13
UBR3Q6ZT12 Z85995.1-201ENST00000415547 335 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 Z85994.2-201ENST00000434327 452 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 HSFY3P-201ENST00000444242 1191 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AC007115.1-201ENST00000546853 234 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AC010928.2-201ENST00000588017 287 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AP003122.6-201ENST00000623831 495 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 SNORD114-26-201ENST00000363543 72 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AC073264.1-201ENST00000411508 416 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 HMGN2P38-201ENST00000423806 265 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 RPS6P15-201ENST00000431996 751 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 RPL17P49-201ENST00000443728 411 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 Z96811.1-201ENST00000445880 108 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 RPL21P103-201ENST00000479921 488 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AC008885.2-201ENST00000509506 930 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 RNA5SP364-201ENST00000516938 78 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 RN7SKP5-201ENST00000517045 272 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 RNU6-1223P-201ENST00000517124 104 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 RNU6-711P-201ENST00000517255 106 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 MIR5694-201ENST00000581190 76 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AP001180.3-201ENST00000582221 145 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 DUXAP4-201ENST00000603046 613 ntBASIC1.75□□□□□ -2.13
UBR3Q6ZT12 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.75□□□□□ -2.13
UBR3Q6ZT12 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
UBR3Q6ZT12 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
UBR3Q6ZT12 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
UBR3Q6ZT12 RNU6-1180P-201ENST00000364935 107 ntBASIC1.74□□□□□ -2.13
UBR3Q6ZT12 RNU6-1080P-201ENST00000383982 107 ntBASIC1.74□□□□□ -2.13
UBR3Q6ZT12 MIR144-201ENST00000384886 86 ntBASIC1.74□□□□□ -2.13
UBR3Q6ZT12 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.74□□□□□ -2.13
UBR3Q6ZT12 AL137100.2-201ENST00000555786 315 ntBASIC1.74□□□□□ -2.13
UBR3Q6ZT12 AC023813.2-201ENST00000564321 469 ntBASIC1.74□□□□□ -2.13
UBR3Q6ZT12 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.74□□□□□ -2.13
UBR3Q6ZT12 MIR6078-201ENST00000611069 100 ntBASIC1.74□□□□□ -2.13
UBR3Q6ZT12 MIR6734-201ENST00000621166 68 ntBASIC1.74□□□□□ -2.13
UBR3Q6ZT12 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.74□□□□□ -2.13
UBR3Q6ZT12 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.73□□□□□ -2.13
UBR3Q6ZT12 FO393413.1-201ENST00000402892 195 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms