Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU4-40P-201ENST00000364351 143 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 RNU6-769P-201ENST00000384407 104 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 Y_RNA.548-201ENST00000384656 105 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 MIR7-3-201ENST00000384898 110 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AC069157.1-201ENST00000421749 137 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 MTCO3P45-201ENST00000443036 613 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 CBWD4P-201ENST00000445695 655 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 RPL21P23-201ENST00000446654 460 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 ELOCP30-201ENST00000447108 299 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 TPT1P14-201ENST00000448018 505 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AL031183.1-201ENST00000457667 207 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 RPS15AP36-201ENST00000492022 382 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AC020893.1-201ENST00000502452 580 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AC010265.1-201ENST00000513509 211 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 RNU6-390P-201ENST00000516259 103 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 IGKV2-26-201ENST00000518305 343 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 MRPS36P3-201ENST00000519284 130 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AC034105.3-201ENST00000565294 442 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 PRELID3BP8-201ENST00000604148 295 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AL161729.4-201ENST00000604650 476 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 HSPE1P7-201ENST00000604681 321 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AC091965.4-201ENST00000607691 587 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AC090970.3-201ENST00000612566 866 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AC090132.2-201ENST00000615881 347 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AL034408.1-202ENST00000636088 415 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AC032011.1-201ENST00000611703 1549 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 RNU1-75P-201ENST00000347264 129 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 SNORD46.1-201ENST00000364139 104 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 MIR449B-201ENST00000384995 97 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 RPL17P50-201ENST00000396131 546 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 RSL24D1P4-201ENST00000400938 484 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AL513331.1-201ENST00000411908 397 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 MTND4P20-201ENST00000424125 869 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 MTND1P20-201ENST00000430341 950 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC092641.1-201ENST00000440229 772 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 RPL7P36-201ENST00000444633 681 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC008481.1-201ENST00000463278 396 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 RPS20P22-201ENST00000473700 357 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC112673.1-201ENST00000513168 575 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 SNORA70.19-201ENST00000516717 90 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 MTND2P38-201ENST00000522536 667 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AP002748.2-201ENST00000528671 348 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AP000867.2-201ENST00000532468 320 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 OR5B10P-201ENST00000532869 642 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC004024.1-201ENST00000549244 247 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC093012.1-202ENST00000549403 582 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC025811.1-201ENST00000604312 472 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC103710.4-201ENST00000609301 899 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NHLRC1Q6VVB1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.06□□□□□ -1.92
NHLRC1Q6VVB1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NHLRC1Q6VVB1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.06□□□□□ -1.92
NHLRC1Q6VVB1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NHLRC1Q6VVB1 RNU6-433P-201ENST00000363216 104 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms