Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 XKRY2-201ENST00000442362 1093 ntBASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 RPL23AP63-201ENST00000498752 471 ntBASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 AC110079.1-202ENST00000635213 138 ntBASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 SNORD48-201ENST00000364953 64 ntBASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 SNORA1.3-201ENST00000384676 136 ntBASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 RPS4XP3-201ENST00000398541 413 ntBASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 OR4K11P-201ENST00000431829 904 ntBASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 MTCYBP34-201ENST00000439552 670 ntBASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 AC006499.2-201ENST00000513470 337 ntBASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 AC007375.1-201ENST00000554513 578 ntBASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 MIR3122-201ENST00000577243 73 ntBASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC171Q6TFL3 SFR1P1-201ENST00000403720 688 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 RPL23AP39-201ENST00000415533 405 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AL445687.1-201ENST00000439946 251 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 RPL31P53-201ENST00000457065 348 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 RNU6-991P-201ENST00000516168 107 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 RNA5SP458-201ENST00000516188 119 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 RNU2-44P-201ENST00000516795 194 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 RN7SKP219-201ENST00000516825 296 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AC090751.1-201ENST00000566966 267 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AC008749.1-201ENST00000597650 306 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AC084768.2-201ENST00000622736 221 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 AC095031.1-201ENST00000623685 672 ntBASIC2.12□□□□□ -2.07
CCDC171Q6TFL3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 AL359893.1-201ENST00000447628 1580 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 AC103710.2-202ENST00000641454 2853 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 SDCBPP1-201ENST00000440192 890 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 TPT1P14-201ENST00000448018 505 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 RNU7-26P-201ENST00000458980 63 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 AC104564.1-201ENST00000493028 407 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 OR5BM1P-201ENST00000512021 366 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 AC083923.1-201ENST00000523708 376 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 AC024614.2-201ENST00000577584 372 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 AC091834.1-201ENST00000614543 472 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 MFSD8-245ENST00000641743 948 ntBASIC2.11□□□□□ -2.07
CCDC171Q6TFL3 NSRP1P1-201ENST00000444067 1693 ntBASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 SPA17P1-201ENST00000416656 452 ntBASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 CYCSP49-201ENST00000420810 319 ntBASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 AL645568.3-201ENST00000433683 316 ntBASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 TRAV28-201ENST00000557548 323 ntBASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 ZNF92P3-201ENST00000596594 954 ntBASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 AC005021.1-201ENST00000608730 355 ntBASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 HMGB1P24-202ENST00000615653 685 ntBASIC2.1□□□□□ -2.07
CCDC171Q6TFL3 AP005901.5-201ENST00000545779 1796 ntBASIC2.09□□□□□ -2.07
CCDC171Q6TFL3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC171Q6TFL3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 AL450338.1-201ENST00000407987 512 ntBASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 SNORD23.1-201ENST00000408212 104 ntBASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms