Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.57□□□□□ -1.68
KRT40Q6A162 PCBP2P3-201ENST00000509726 843 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC021146.1-201ENST00000511202 716 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.57□□□□□ -1.68
KRT40Q6A162 RNA5SP401-201ENST00000515920 127 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.57□□□□□ -1.68
KRT40Q6A162 AP000907.2-201ENST00000530827 353 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 YPEL5P3-201ENST00000547227 352 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC091516.1-201ENST00000549191 703 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.57□□□□□ -1.68
KRT40Q6A162 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.57□□□□□ -1.68
KRT40Q6A162 AC015917.1-201ENST00000579654 510 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 MIR3146-201ENST00000580367 79 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC018638.8-201ENST00000588755 281 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.57□□□□□ -1.68
KRT40Q6A162 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.57□□□□□ -1.68
KRT40Q6A162 AC115621.1-201ENST00000604653 858 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 Z84480.1-201ENST00000605131 311 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC116447.1-201ENST00000613153 453 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AL591424.2-201ENST00000617023 128 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 MIR6500-201ENST00000622700 86 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 MTND1P37-201ENST00000636562 264 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
KRT40Q6A162 AL118496.1-201ENST00000440201 1812 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.57□□□□□ -1.68
KRT40Q6A162 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
KRT40Q6A162 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
KRT40Q6A162 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
KRT40Q6A162 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.57□□□□□ -1.68
KRT40Q6A162 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.56□□□□□ -1.68
KRT40Q6A162 AL157700.1-201ENST00000561973 1432 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 RPL7P26-201ENST00000333817 754 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 RNU6-845P-201ENST00000362578 103 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 RNA5SP258-201ENST00000362750 119 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 SNORD81.2-201ENST00000365153 76 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 RNU6-116P-201ENST00000384042 109 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 RNU6-74P-201ENST00000384235 107 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRT40Q6A162 AL354719.1-201ENST00000406535 843 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 RN7SKP177-201ENST00000410567 355 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 RPL7AP73-201ENST00000413490 353 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 AC009302.1-201ENST00000417147 390 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT40Q6A162 RPS15AP12-201ENST00000419498 388 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT40Q6A162 OR4F13P-201ENST00000428478 931 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 RPL36AP53-201ENST00000432891 316 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.56□□□□□ -1.68
KRT40Q6A162 AC105402.2-201ENST00000438503 358 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT40Q6A162 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.56□□□□□ -1.68
KRT40Q6A162 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT40Q6A162 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.56□□□□□ -1.68
KRT40Q6A162 RNU6-261P-201ENST00000459506 102 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 MTCO2P29-201ENST00000465212 189 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 AC233702.1-201ENST00000482905 502 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT40Q6A162 MTCO3P9-201ENST00000506989 781 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 FGF7P4-201ENST00000509595 295 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT40Q6A162 SNORA70.24-201ENST00000517233 118 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT40Q6A162 OR4P1P-201ENST00000530808 1136 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.56□□□□□ -1.68
KRT40Q6A162 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT40Q6A162 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.56□□□□□ -1.68
KRT40Q6A162 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.56□□□□□ -1.68
KRT40Q6A162 AC018552.3-201ENST00000567416 561 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 AC060771.1-201ENST00000582031 164 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 MIR4795-201ENST00000584182 89 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 AC091167.4-201ENST00000605079 184 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRT40Q6A162 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
KRT40Q6A162 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRT40Q6A162 AC018555.1-201ENST00000567548 1980 ntBASIC4.56□□□□□ -1.68
KRT40Q6A162 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.56□□□□□ -1.68
KRT40Q6A162 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.56□□□□□ -1.68
KRT40Q6A162 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KRT40Q6A162 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRT40Q6A162 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRT40Q6A162 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRT40Q6A162 IPO8P1-201ENST00000455509 3109 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 LINC02471-203ENST00000641941 4752 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 UBE3AP2-201ENST00000429033 2259 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRT40Q6A162 SNORD82-201ENST00000365530 70 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 RNU6-767P-201ENST00000384132 107 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 ELOCP4-201ENST00000420090 333 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.55□□□□□ -1.68
KRT40Q6A162 AL691449.1-201ENST00000426570 421 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT40Q6A162 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.55□□□□□ -1.68
KRT40Q6A162 GPR143P-201ENST00000434155 205 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.55□□□□□ -1.68
KRT40Q6A162 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT40Q6A162 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.55□□□□□ -1.68
KRT40Q6A162 AC239809.1-201ENST00000450470 217 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 RPS20P24-201ENST00000457473 361 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms