Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC119751.7-201ENST00000600494 245 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AL590229.1-201ENST00000603497 542 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC093732.2-201ENST00000607950 274 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC239868.4-201ENST00000608318 671 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AL356321.1-201ENST00000621360 228 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AF117829.1-206ENST00000621883 3802 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC118273.1-201ENST00000525324 3006 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 Y_RNA.97-201ENST00000363094 102 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 U3.4-201ENST00000363352 213 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 RNU6-173P-201ENST00000364215 104 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 CCDC58P2-201ENST00000417131 366 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 SEPT2P1-201ENST00000419651 180 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 YPEL5P1-201ENST00000419731 367 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC244035.1-201ENST00000430042 390 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AL365184.2-201ENST00000431139 435 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC108734.1-201ENST00000439549 399 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 MTND1P30-201ENST00000441241 901 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC025750.2-201ENST00000442609 450 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC112653.1-201ENST00000443851 386 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 RAC1P7-201ENST00000445367 377 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC105914.1-201ENST00000511798 226 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 RPL12P22-201ENST00000519073 490 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 HIGD1AP10-201ENST00000527837 282 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC007115.1-201ENST00000546853 234 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC005476.1-201ENST00000554427 397 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC015917.1-201ENST00000579654 510 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 BDH2P1-201ENST00000602288 736 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AL157817.1-201ENST00000614264 790 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 MIR7844-201ENST00000616161 122 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC138932.5-201ENST00000617759 563 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 MTCO1P9-201ENST00000505577 1534 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 FAM35DP-201ENST00000323387 2712 ntBASIC3.27□□□□□ -1.89
LYSMD4Q5XG99 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AL353746.1-201ENST00000566293 6881 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC010733.2-201ENST00000589496 5702 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 RNA5SP295-201ENST00000362655 121 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 Y_RNA.51-201ENST00000362725 102 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 RNA5SP322-201ENST00000363617 119 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 SNORA5B-201ENST00000363786 132 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 RNU6-769P-201ENST00000384407 104 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 RNU1-89P-201ENST00000384592 164 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 RNU2-43P-201ENST00000410306 190 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AMD1P2-201ENST00000412936 992 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC109780.2-201ENST00000413467 845 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC007390.1-201ENST00000415722 356 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 CYCSP46-201ENST00000423569 204 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AL589823.1-201ENST00000429577 183 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 GDI2P2-201ENST00000445131 608 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AL357552.1-201ENST00000445254 415 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AL360221.1-201ENST00000445989 335 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 OR6K1P-201ENST00000456766 971 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC091965.2-201ENST00000512324 613 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.26□□□□□ -1.89
LYSMD4Q5XG99 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms