Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.31□□□□□ -1.4
VARS2Q5ST30 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.31□□□□□ -1.4
VARS2Q5ST30 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VARS2Q5ST30 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VARS2Q5ST30 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VARS2Q5ST30 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VARS2Q5ST30 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
VARS2Q5ST30 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
VARS2Q5ST30 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VARS2Q5ST30 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VARS2Q5ST30 AC079753.1-201ENST00000623243 3868 ntBASIC6.3□□□□□ -1.4
VARS2Q5ST30 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VARS2Q5ST30 RNU6-915P-201ENST00000364943 103 ntBASIC6.3□□□□□ -1.4
VARS2Q5ST30 RPS20P1-201ENST00000434853 354 ntBASIC6.3□□□□□ -1.4
VARS2Q5ST30 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 AL353748.1-201ENST00000440753 474 ntBASIC6.3□□□□□ -1.4
VARS2Q5ST30 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 AC103996.1-201ENST00000555468 102 ntBASIC6.3□□□□□ -1.4
VARS2Q5ST30 AC007494.1-201ENST00000562293 760 ntBASIC6.3□□□□□ -1.4
VARS2Q5ST30 RN7SL802P-201ENST00000577858 299 ntBASIC6.3□□□□□ -1.4
VARS2Q5ST30 AC010928.2-201ENST00000588017 287 ntBASIC6.3□□□□□ -1.4
VARS2Q5ST30 SRGNP1-201ENST00000603392 451 ntBASIC6.3□□□□□ -1.4
VARS2Q5ST30 MIR6748-201ENST00000610433 71 ntBASIC6.3□□□□□ -1.4
VARS2Q5ST30 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
VARS2Q5ST30 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VARS2Q5ST30 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VARS2Q5ST30 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.3□□□□□ -1.4
VARS2Q5ST30 AC027228.2-201ENST00000567141 2154 ntBASIC6.3□□□□□ -1.4
VARS2Q5ST30 AC018555.1-201ENST00000567548 1980 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VARS2Q5ST30 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
VARS2Q5ST30 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VARS2Q5ST30 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
VARS2Q5ST30 RNA5SP234-201ENST00000363916 119 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 RNA5SP211-201ENST00000365516 117 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 RNU6-395P-201ENST00000365662 106 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 MRPL53P1-201ENST00000414323 319 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 AC022022.1-201ENST00000430304 178 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 AC005042.3-201ENST00000453230 174 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 AC231760.1-201ENST00000498002 260 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 RN7SKP67-201ENST00000515905 235 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 TXNP4-201ENST00000575018 310 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 AL139099.4-201ENST00000614802 114 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 AL353748.2-201ENST00000622148 471 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 UGP2-230ENST00000626380 276 ntTSL 5 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 AL773545.4-201ENST00000637262 310 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 AL513478.4-201ENST00000641636 310 ntBASIC6.29□□□□□ -1.4
VARS2Q5ST30 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VARS2Q5ST30 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VARS2Q5ST30 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
VARS2Q5ST30 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VARS2Q5ST30 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VARS2Q5ST30 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VARS2Q5ST30 AC006600.2-201ENST00000624834 2506 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 Y_RNA.251-201ENST00000364551 99 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 Y_RNA.294-201ENST00000364916 102 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 SNORA70H-201ENST00000383910 135 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 SNORA70J-201ENST00000384182 135 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 Y_RNA.534-201ENST00000384599 112 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 RNU4-34P-201ENST00000410431 124 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 AC006461.1-201ENST00000412637 326 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 MYL6P5-201ENST00000412707 459 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 ACA64.4-201ENST00000459070 127 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 RN7SL184P-201ENST00000488308 297 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 NDUFB5P1-201ENST00000508134 564 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 IGLV3-30-201ENST00000524362 298 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 AC109810.1-201ENST00000534066 224 ntBASIC6.28□□□□□ -1.4
VARS2Q5ST30 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.28□□□□□ -1.4
VARS2Q5ST30 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms