Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC008676.3-201ENST00000521237 435 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.77□□□□□ -2.13
CCDC58Q4VC31 FAM92A1P1-201ENST00000528023 890 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AC005000.2-201ENST00000605468 310 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AC026790.2-201ENST00000606282 430 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC58Q4VC31 MTND5P6-201ENST00000422338 1798 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AC103710.2-202ENST00000641454 2853 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 ADAM3A-203ENST00000461344 2157 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AL390862.1-201ENST00000635467 1469 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 SNORA5B-201ENST00000363786 132 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 RNU1-73P-201ENST00000383971 164 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 RNU6-220P-201ENST00000390919 107 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 RPL27AP8-201ENST00000424277 446 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AC027124.2-201ENST00000428249 105 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AC236972.1-201ENST00000433225 199 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 CDC42P1-201ENST00000456658 548 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AC126389.1-201ENST00000477436 290 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 SETP6-201ENST00000479329 568 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 IGKV3-31-201ENST00000523109 329 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AP003122.3-201ENST00000526316 255 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 EIF4EP5-201ENST00000528228 640 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AC117490.2-201ENST00000610042 594 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.76□□□□□ -2.13
CCDC58Q4VC31 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC58Q4VC31 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 RNU1-91P-201ENST00000364746 163 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 RNU6-1197P-201ENST00000391183 107 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 RPS20P15-201ENST00000412792 311 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 PGBD4P6-201ENST00000421501 610 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 GTF2IP20-201ENST00000431663 360 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AC004866.2-201ENST00000438285 481 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AC117525.1-201ENST00000515228 503 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 SNORA31.25-201ENST00000517242 134 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 CYCSP2-201ENST00000558168 301 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AC025588.2-201ENST00000604851 466 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AL392048.1-201ENST00000613946 534 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 OR1S1-201ENST00000624470 978 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AP003399.1-201ENST00000637534 361 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CCDC58Q4VC31 AC006020.1-201ENST00000420179 1854 ntBASIC1.75□□□□□ -2.13
CCDC58Q4VC31 RNU6-270P-201ENST00000364131 105 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 AL512604.1-201ENST00000404812 257 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 AC090774.1-201ENST00000435925 246 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 AC093155.1-201ENST00000440164 826 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 AL500527.1-201ENST00000448532 255 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 MTCO1P42-201ENST00000457379 726 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 AC104090.1-201ENST00000506341 1171 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC58Q4VC31 AC104108.1-201ENST00000509930 412 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC58Q4VC31 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC58Q4VC31 AC009063.1-201ENST00000563342 702 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 DEFB122-202ENST00000569013 197 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 MIR3162-201ENST00000581818 82 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 DNAJC19P3-201ENST00000594491 331 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 AL356266.1-201ENST00000623311 483 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC58Q4VC31 AC243829.7-201ENST00000633081 225 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 AC080128.1-201ENST00000474389 1917 ntBASIC1.74□□□□□ -2.13
CCDC58Q4VC31 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC58Q4VC31 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms