Protein–RNA interactions for Protein: Q16740

CLPP, ATP-dependent Clp protease proteolytic subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPPQ16740 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLPPQ16740 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CLPPQ16740 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.07□□□□□ -1.92
CLPPQ16740 AC099654.7-201ENST00000635788 2127 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CLPPQ16740 FRG1BP-201ENST00000278882 761 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLPPQ16740 Y_RNA.234-201ENST00000364409 97 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 RNU6-157P-201ENST00000383957 107 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 RNU2-43P-201ENST00000410306 190 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 RNU6-757P-201ENST00000410334 100 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.07□□□□□ -1.92
CLPPQ16740 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.07□□□□□ -1.92
CLPPQ16740 UBE2D3P2-201ENST00000424409 445 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.07□□□□□ -1.92
CLPPQ16740 SNRPEP7-201ENST00000438350 220 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 RAC1P7-201ENST00000445367 377 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 Z73417.1-201ENST00000447373 778 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.07□□□□□ -1.92
CLPPQ16740 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.07□□□□□ -1.92
CLPPQ16740 AC104563.1-201ENST00000476147 376 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.07□□□□□ -1.92
CLPPQ16740 AC091951.3-201ENST00000504093 246 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 RNU5A-4P-201ENST00000516588 111 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 MIR2276-201ENST00000516886 89 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 AC125611.2-201ENST00000551907 647 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 AC106782.4-201ENST00000568264 210 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 AC061975.8-201ENST00000587058 721 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.07□□□□□ -1.92
CLPPQ16740 AL596327.1-201ENST00000603629 213 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 AC019159.1-201ENST00000605094 187 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 AL133507.1-201ENST00000605269 557 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 AC092106.3-201ENST00000611308 722 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 AC107871.2-201ENST00000612894 502 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 AL513185.3-201ENST00000433335 1300 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLPPQ16740 ZNF876P-202ENST00000398732 1485 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLPPQ16740 AC009812.4-201ENST00000569134 1805 ntBASIC3.07□□□□□ -1.92
CLPPQ16740 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLPPQ16740 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.06□□□□□ -1.92
CLPPQ16740 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLPPQ16740 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CLPPQ16740 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLPPQ16740 FAM133CP-201ENST00000332869 704 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AL161781.1-201ENST00000354277 403 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 RNU4-28P-201ENST00000364739 141 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 RNU6-359P-201ENST00000365466 108 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
CLPPQ16740 FAT1P1-201ENST00000406588 507 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 BX682237.1-201ENST00000415016 335 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 CCDC58P2-201ENST00000417131 366 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.06□□□□□ -1.92
CLPPQ16740 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.06□□□□□ -1.92
CLPPQ16740 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.06□□□□□ -1.92
CLPPQ16740 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.06□□□□□ -1.92
CLPPQ16740 TXNL1P1-201ENST00000429528 554 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 Z80107.1-201ENST00000436830 412 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 CST9LP2-201ENST00000437612 320 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.06□□□□□ -1.92
CLPPQ16740 OR6K5P-201ENST00000447050 945 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.06□□□□□ -1.92
CLPPQ16740 MTND1P31-201ENST00000449206 961 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.06□□□□□ -1.92
CLPPQ16740 SNORD121B-201ENST00000458838 81 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 SNORA59A-201ENST00000459326 152 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 RPL30P14-201ENST00000482744 348 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.06□□□□□ -1.92
CLPPQ16740 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.06□□□□□ -1.92
CLPPQ16740 CUL1P1-201ENST00000509510 2425 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AC024589.1-201ENST00000512207 263 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AC022483.1-201ENST00000514020 567 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AC119751.5-201ENST00000514077 770 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 RNU6-714P-201ENST00000516963 103 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AC105185.1-201ENST00000518705 535 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.06□□□□□ -1.92
CLPPQ16740 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.06□□□□□ -1.92
CLPPQ16740 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.06□□□□□ -1.92
CLPPQ16740 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.06□□□□□ -1.92
CLPPQ16740 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.06□□□□□ -1.92
CLPPQ16740 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CLPPQ16740 DUXAP1-201ENST00000556632 463 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.06□□□□□ -1.92
CLPPQ16740 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.06□□□□□ -1.92
CLPPQ16740 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.06□□□□□ -1.92
CLPPQ16740 AC011451.2-201ENST00000604303 598 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AC105148.1-201ENST00000604961 409 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AL590099.1-201ENST00000615276 138 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AC002550.2-201ENST00000621246 394 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AC023510.2-201ENST00000622162 746 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AC099506.2-201ENST00000623074 221 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CLPPQ16740 AC079228.1-201ENST00000624774 1049 ntBASIC3.06□□□□□ -1.92
CLPPQ16740 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.06□□□□□ -1.92
CLPPQ16740 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLPPQ16740 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLPPQ16740 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLPPQ16740 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLPPQ16740 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms