Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.05□□□□□ -1.92
SIX1Q15475 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.05□□□□□ -1.92
SIX1Q15475 PIGPP4-201ENST00000584447 307 ntBASIC3.05□□□□□ -1.92
SIX1Q15475 AL353997.4-201ENST00000586196 166 ntBASIC3.05□□□□□ -1.92
SIX1Q15475 AC010620.1-201ENST00000601088 1102 ntBASIC3.05□□□□□ -1.92
SIX1Q15475 AC105129.3-201ENST00000605455 485 ntBASIC3.05□□□□□ -1.92
SIX1Q15475 AC069234.5-201ENST00000611056 416 ntBASIC3.05□□□□□ -1.92
SIX1Q15475 AC107871.2-201ENST00000612894 502 ntBASIC3.05□□□□□ -1.92
SIX1Q15475 AL596245.1-201ENST00000618994 362 ntBASIC3.05□□□□□ -1.92
SIX1Q15475 AC008443.7-201ENST00000622195 246 ntBASIC3.05□□□□□ -1.92
SIX1Q15475 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.05□□□□□ -1.92
SIX1Q15475 AL356266.1-201ENST00000623311 483 ntBASIC3.05□□□□□ -1.92
SIX1Q15475 AC091965.5-201ENST00000624785 342 ntBASIC3.05□□□□□ -1.92
SIX1Q15475 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIX1Q15475 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIX1Q15475 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIX1Q15475 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIX1Q15475 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIX1Q15475 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.04□□□□□ -1.92
SIX1Q15475 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIX1Q15475 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.04□□□□□ -1.92
SIX1Q15475 GABPAP-201ENST00000419271 1356 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIX1Q15475 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIX1Q15475 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SIX1Q15475 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIX1Q15475 MIR181A2-201ENST00000384863 110 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SIX1Q15475 MIR320C1-201ENST00000408566 88 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.04□□□□□ -1.92
SIX1Q15475 HMGB1P11-201ENST00000413899 637 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 BMS1P22-201ENST00000414726 313 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX1Q15475 MED14P1-201ENST00000430517 648 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 OR2B8P-201ENST00000432841 938 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 LARP1BP3-201ENST00000437229 869 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 RSU1P2-202ENST00000437884 485 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AL138799.3-201ENST00000438968 350 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX1Q15475 MTND2P4-201ENST00000445034 1004 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AL162389.1-201ENST00000449233 177 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 ZNF114P1-201ENST00000453500 292 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AL122001.1-201ENST00000457027 370 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AC104563.1-201ENST00000476147 376 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AC092451.1-201ENST00000480211 153 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX1Q15475 AC093677.1-201ENST00000514414 678 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX1Q15475 MTND5P4-201ENST00000514978 288 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX1Q15475 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
SIX1Q15475 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.04□□□□□ -1.92
SIX1Q15475 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIX1Q15475 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX1Q15475 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX1Q15475 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX1Q15475 AC090616.5-202ENST00000582111 297 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX1Q15475 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.04□□□□□ -1.92
SIX1Q15475 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.04□□□□□ -1.92
SIX1Q15475 AF131215.7-201ENST00000602443 707 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AC107214.2-201ENST00000608204 634 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AC093783.1-201ENST00000612976 329 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX1Q15475 AL590240.3-201ENST00000621416 943 ntBASIC3.04□□□□□ -1.92
SIX1Q15475 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.04□□□□□ -1.92
SIX1Q15475 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIX1Q15475 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIX1Q15475 AF127577.6-201ENST00000623352 2191 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AL672167.1-206ENST00000356293 943 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 SNORD116-1-201ENST00000384335 95 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 MIR1305-201ENST00000408300 86 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 RN7SKP123-201ENST00000410732 291 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.03□□□□□ -1.92
SIX1Q15475 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.03□□□□□ -1.92
SIX1Q15475 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX1Q15475 AC006028.1-201ENST00000438379 402 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 CYCSP32-201ENST00000440548 321 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AL831737.1-201ENST00000441288 271 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.03□□□□□ -1.92
SIX1Q15475 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.03□□□□□ -1.92
SIX1Q15475 HMGN2P21-201ENST00000447764 270 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX1Q15475 HMGB1P15-201ENST00000453854 435 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AC106872.3-201ENST00000495104 446 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.03□□□□□ -1.92
SIX1Q15475 COX7A2P2-201ENST00000505291 250 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AC022447.3-201ENST00000506865 495 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX1Q15475 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.03□□□□□ -1.92
SIX1Q15475 AC008885.1-201ENST00000514930 301 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.03□□□□□ -1.92
SIX1Q15475 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SIX1Q15475 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX1Q15475 HIGD1AP10-201ENST00000527837 282 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 OR4P1P-201ENST00000530808 1136 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AP004247.1-201ENST00000531556 1289 ntBASIC3.03□□□□□ -1.92
SIX1Q15475 AC013828.2-201ENST00000532487 235 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms