Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AC084035.1-201ENST00000634543 607 ntBASIC3.21□□□□□ -1.9
UBXN1Q04323 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.21□□□□□ -1.9
UBXN1Q04323 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UBXN1Q04323 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
UBXN1Q04323 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.2□□□□□ -1.9
UBXN1Q04323 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
UBXN1Q04323 AC138915.1-201ENST00000565427 1685 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.2□□□□□ -1.9
UBXN1Q04323 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBXN1Q04323 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UBXN1Q04323 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBXN1Q04323 RNU6-289P-201ENST00000364093 107 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBXN1Q04323 SNORD21-201ENST00000383953 95 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 RN7SKP220-201ENST00000410611 288 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 MTCO2P8-201ENST00000412213 658 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 AL513175.2-201ENST00000422071 443 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 AL390023.1-201ENST00000428836 262 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 AL714022.1-201ENST00000439897 151 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 RPL21P2-201ENST00000440049 481 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 AL591503.2-201ENST00000442314 1005 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.2□□□□□ -1.9
UBXN1Q04323 AL009048.1-201ENST00000450437 298 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.2□□□□□ -1.9
UBXN1Q04323 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 AC116337.2-201ENST00000477662 156 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 HSPD1P15-201ENST00000505573 1122 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.2□□□□□ -1.9
UBXN1Q04323 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.2□□□□□ -1.9
UBXN1Q04323 CCNG2P1-201ENST00000549521 1000 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 TRAV28-201ENST00000557548 323 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.2□□□□□ -1.9
UBXN1Q04323 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.2□□□□□ -1.9
UBXN1Q04323 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.2□□□□□ -1.9
UBXN1Q04323 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.2□□□□□ -1.9
UBXN1Q04323 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.2□□□□□ -1.9
UBXN1Q04323 AC078899.3-201ENST00000599065 212 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 AC010620.2-201ENST00000600135 313 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 AC015871.2-201ENST00000603605 948 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.2□□□□□ -1.9
UBXN1Q04323 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.2□□□□□ -1.9
UBXN1Q04323 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
UBXN1Q04323 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.2□□□□□ -1.9
UBXN1Q04323 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBXN1Q04323 ZNF519P1-201ENST00000449011 1626 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 AL138713.1-201ENST00000624026 2130 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBXN1Q04323 RNU1-105P-201ENST00000363470 161 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
UBXN1Q04323 MIR181A2-201ENST00000384863 110 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 RNA5SP120-201ENST00000410900 112 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 RNU6-516P-201ENST00000411381 104 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.19□□□□□ -1.9
UBXN1Q04323 AC099548.1-201ENST00000421443 426 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 AL365496.1-201ENST00000426885 215 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.19□□□□□ -1.9
UBXN1Q04323 BNIP3P2-201ENST00000441221 577 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.19□□□□□ -1.9
UBXN1Q04323 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.19□□□□□ -1.9
UBXN1Q04323 Z96811.1-201ENST00000445880 108 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBXN1Q04323 EEF1E1P1-201ENST00000446998 430 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 GAPDHP27-201ENST00000447427 1020 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.19□□□□□ -1.9
UBXN1Q04323 PAXBP1P1-201ENST00000449315 447 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 ATG12P2-201ENST00000456830 416 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 SNORA84-201ENST00000459229 133 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 RNU7-23P-201ENST00000459465 62 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 RPS27P26-201ENST00000494583 239 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 AC010587.2-201ENST00000511727 448 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.19□□□□□ -1.9
UBXN1Q04323 AL157394.1-201ENST00000562983 1224 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 BNIP3P40-201ENST00000596017 556 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 RNU4-5P-201ENST00000607255 135 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 Z99129.2-201ENST00000619967 314 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 AC106754.1-201ENST00000562632 1513 ntBASIC3.19□□□□□ -1.9
UBXN1Q04323 AL161431.1-201ENST00000618966 4205 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 ZNF29P-201ENST00000225587 168 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBXN1Q04323 SNORA63.1-201ENST00000362493 131 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 ATP5F1P3-201ENST00000397213 657 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 MTND1P21-201ENST00000412991 285 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.18□□□□□ -1.9
UBXN1Q04323 AC106883.1-201ENST00000418805 562 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 RPL7P37-201ENST00000425095 738 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.18□□□□□ -1.9
UBXN1Q04323 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
UBXN1Q04323 AC092155.2-201ENST00000454675 477 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 RPS20P20-201ENST00000460498 340 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 AC233702.1-201ENST00000482905 502 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 AP001025.2-201ENST00000490908 477 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 RNA5SP291-201ENST00000517222 105 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 HMGN1P28-201ENST00000521340 364 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 MTCO1P47-201ENST00000523889 1271 ntBASIC3.18□□□□□ -1.9
UBXN1Q04323 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.18□□□□□ -1.9
UBXN1Q04323 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
UBXN1Q04323 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.18□□□□□ -1.9
UBXN1Q04323 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.18□□□□□ -1.9
UBXN1Q04323 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms