Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RPS3AP44-201ENST00000425466 790 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC0.92□□□□□ -2.26
HSPG2P98160 RPS3AP22-201ENST00000488297 769 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
HSPG2P98160 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC0.92□□□□□ -2.26
HSPG2P98160 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.92□□□□□ -2.26
HSPG2P98160 CYP3A137P-201ENST00000562436 69 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AC068338.1-201ENST00000565567 176 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 SUB1P4-201ENST00000566062 339 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AC013444.2-201ENST00000603317 787 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AC083899.3-201ENST00000603413 594 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 BNIP3P4-201ENST00000604946 565 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AL159169.2-201ENST00000610061 1269 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
HSPG2P98160 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
HSPG2P98160 SNORA16.1-201ENST00000364597 132 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 RPL31P2-201ENST00000413849 377 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AC109583.1-201ENST00000432156 268 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 SETP8-201ENST00000435341 628 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 MTCO3P44-201ENST00000510977 541 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 FABP5P5-201ENST00000515537 406 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AC084364.2-201ENST00000546924 395 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.92□□□□□ -2.26
HSPG2P98160 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.92□□□□□ -2.26
HSPG2P98160 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.92□□□□□ -2.26
HSPG2P98160 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
HSPG2P98160 AL596028.1-201ENST00000326971 197 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AC092638.1-201ENST00000411966 1275 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.92□□□□□ -2.26
HSPG2P98160 AC073901.1-201ENST00000462471 408 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AC008885.2-201ENST00000509506 930 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC0.92□□□□□ -2.26
HSPG2P98160 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HSPG2P98160 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
HSPG2P98160 MIR320A-201ENST00000385302 82 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 AL645568.3-201ENST00000433683 316 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC0.91□□□□□ -2.26
HSPG2P98160 AC009474.2-201ENST00000451383 136 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC0.91□□□□□ -2.26
HSPG2P98160 MIR5694-201ENST00000581190 76 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 AC090970.3-201ENST00000612566 866 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 C2orf27A-204ENST00000623058 969 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 AC022513.1-201ENST00000624512 117 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 AL157827.1-201ENST00000447622 132 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.91□□□□□ -2.26
HSPG2P98160 AC089999.1-201ENST00000460336 374 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 HMGN1P8-201ENST00000463578 288 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HSPG2P98160 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.91□□□□□ -2.26
HSPG2P98160 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC0.91□□□□□ -2.26
HSPG2P98160 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.91□□□□□ -2.26
HSPG2P98160 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
HSPG2P98160 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HSPG2P98160 AL033519.2-201ENST00000403958 392 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 FNDC3CP-201ENST00000420795 1155 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 RPL21P39-201ENST00000463605 483 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 DYNLL1P5-201ENST00000467158 270 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 RPS29P20-201ENST00000489592 171 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.91□□□□□ -2.26
HSPG2P98160 HSPE1P3-201ENST00000559254 309 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 MIR4716-201ENST00000579628 84 ntBASIC0.91□□□□□ -2.26
HSPG2P98160 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.9□□□□□ -2.26
HSPG2P98160 AL583843.1-201ENST00000456070 346 ntBASIC0.9□□□□□ -2.26
HSPG2P98160 TPRKBP1-201ENST00000456243 481 ntBASIC0.9□□□□□ -2.26
HSPG2P98160 AC079203.1-201ENST00000487972 404 ntBASIC0.9□□□□□ -2.26
HSPG2P98160 SNORA31.24-201ENST00000517232 57 ntBASIC0.9□□□□□ -2.26
HSPG2P98160 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.9□□□□□ -2.26
HSPG2P98160 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
HSPG2P98160 OR51B8P-201ENST00000449892 769 ntBASIC0.9□□□□□ -2.27
HSPG2P98160 AL109741.2-201ENST00000455561 343 ntBASIC0.9□□□□□ -2.27
HSPG2P98160 RNA5SP309-201ENST00000516670 106 ntBASIC0.9□□□□□ -2.27
HSPG2P98160 OR8X1P-201ENST00000534542 869 ntBASIC0.9□□□□□ -2.27
HSPG2P98160 MIR4446-201ENST00000578505 67 ntBASIC0.9□□□□□ -2.27
HSPG2P98160 AC008121.3-201ENST00000618726 433 ntBASIC0.9□□□□□ -2.27
HSPG2P98160 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
HSPG2P98160 MTND5P10-201ENST00000603719 1809 ntBASIC0.9□□□□□ -2.27
HSPG2P98160 AC240504.1-201ENST00000395709 845 ntBASIC0.9□□□□□ -2.27
HSPG2P98160 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC0.9□□□□□ -2.27
HSPG2P98160 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC0.9□□□□□ -2.27
HSPG2P98160 RNA5SP337-201ENST00000517007 109 ntBASIC0.9□□□□□ -2.27
HSPG2P98160 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC0.9□□□□□ -2.27
HSPG2P98160 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.9□□□□□ -2.27
HSPG2P98160 ZNF271P-202ENST00000465539 1970 ntBASIC0.9□□□□□ -2.27
HSPG2P98160 RNU6-146P-201ENST00000384602 108 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 PTP4A1P1-201ENST00000420539 515 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 AL445669.1-201ENST00000426743 755 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HSPG2P98160 MTCO1P48-201ENST00000448024 1096 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 COX6CP14-201ENST00000469580 174 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 AC012170.1-201ENST00000495139 359 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 AC105313.1-201ENST00000509121 353 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.89□□□□□ -2.27
HSPG2P98160 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.89□□□□□ -2.27
HSPG2P98160 AC103810.8-201ENST00000607347 118 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 VTRNA1-3-201ENST00000365645 89 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
HSPG2P98160 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC0.89□□□□□ -2.27
HSPG2P98160 FABP5P3-201ENST00000437960 408 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.89□□□□□ -2.27
HSPG2P98160 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms