Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ABCA4P78363 AC026241.1-201ENST00000517873 2142 ntBASIC1.56□□□□□ -2.16
ABCA4P78363 MTND4P23-201ENST00000447723 1363 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 Y_RNA.374-201ENST00000365606 101 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA4P78363 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA4P78363 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA4P78363 AL034418.1-201ENST00000448675 860 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA4P78363 AL137159.1-201ENST00000452808 512 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.55□□□□□ -2.16
ABCA4P78363 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA4P78363 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.55□□□□□ -2.16
ABCA4P78363 RNU1-40P-201ENST00000516816 164 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 RNU1-97P-201ENST00000516872 164 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA4P78363 CBX3P4-201ENST00000538909 354 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA4P78363 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA4P78363 AC034102.8-201ENST00000615146 484 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.55□□□□□ -2.16
ABCA4P78363 AC110079.1-202ENST00000635213 138 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
ABCA4P78363 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
ABCA4P78363 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ABCA4P78363 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.55□□□□□ -2.16
ABCA4P78363 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA4P78363 SNORA51.11-201ENST00000384442 131 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 TATDN1P1-201ENST00000414123 891 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 NDUFA5P10-201ENST00000432147 357 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA4P78363 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.55□□□□□ -2.16
ABCA4P78363 UBBP3-201ENST00000445497 241 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 Z96811.1-201ENST00000445880 108 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 RPL21P39-201ENST00000463605 483 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 AC011979.1-201ENST00000472300 483 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 RPL21P93-201ENST00000480465 489 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 AC233702.1-201ENST00000482905 502 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 AC104435.1-201ENST00000483483 166 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 AC087190.1-201ENST00000484462 480 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 AC093591.1-201ENST00000491435 481 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 AC090255.1-201ENST00000495779 349 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 AC021146.7-201ENST00000509604 775 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 RNU6-250P-201ENST00000516958 103 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA4P78363 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.55□□□□□ -2.16
ABCA4P78363 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.55□□□□□ -2.16
ABCA4P78363 AL133507.1-201ENST00000605269 557 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 AC113194.1-201ENST00000606037 500 ntBASIC1.55□□□□□ -2.16
ABCA4P78363 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.55□□□□□ -2.16
ABCA4P78363 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.55□□□□□ -2.16
ABCA4P78363 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.55□□□□□ -2.16
ABCA4P78363 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.55□□□□□ -2.16
ABCA4P78363 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA4P78363 AL391987.6-201ENST00000305671 199 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA4P78363 AC234782.4-201ENST00000417646 1048 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 TOMM22P1-201ENST00000418578 312 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 TMEM167AP1-201ENST00000423409 219 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA4P78363 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA4P78363 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA4P78363 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.54□□□□□ -2.16
ABCA4P78363 HMGN1P28-201ENST00000521340 364 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.54□□□□□ -2.16
ABCA4P78363 AC125611.2-201ENST00000551907 647 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 AC104581.2-201ENST00000572227 430 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 RN7SL622P-201ENST00000585292 275 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 GLUD1P4-201ENST00000590914 418 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 AC010615.3-201ENST00000597319 394 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 AC011890.2-201ENST00000613393 294 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA4P78363 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA4P78363 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA4P78363 RNU6-673P-201ENST00000365084 104 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 RPL19P1-201ENST00000411635 428 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA4P78363 Z99714.1-201ENST00000450463 807 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA4P78363 AC109471.1-201ENST00000511631 612 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA4P78363 SNORA31.11-201ENST00000516528 139 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.54□□□□□ -2.16
ABCA4P78363 AC087441.2-201ENST00000529141 262 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 NOP56P3-201ENST00000549457 385 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.54□□□□□ -2.16
ABCA4P78363 AC010678.1-201ENST00000614118 713 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 AP005212.4-201ENST00000614206 710 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA4P78363 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
ABCA4P78363 AC006249.1-201ENST00000621223 471 ntBASIC1.54□□□□□ -2.16
ABCA4P78363 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA4P78363 AC008669.1-201ENST00000565823 2178 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
ABCA4P78363 RNU6-1180P-201ENST00000364935 107 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 RNU6-98P-201ENST00000384173 107 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
ABCA4P78363 RNU6-837P-201ENST00000391056 108 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 RNA5SP252-201ENST00000391131 119 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms